7MZK
SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 96
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (C, F) | WCSL 129 heavy chain | polymer | 224 | 23568.5 | 2 | Homo sapiens (human) | ||
| 2 | B, E (B, A) | Spike protein S1 | polymer | 205 | 23073.8 | 2 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
| 3 | C, J (E, D) | WCSL 129 light chain | polymer | 216 | 22751.1 | 2 | Homo sapiens (human) | ||
| 4 | F, H (N, H) | PDI 96 heavy chain | polymer | 229 | 24390.5 | 2 | Homo sapiens (human) | ||
| 5 | G, I (M, L) | PDI 96 light chain | polymer | 220 | 24135.9 | 2 | Homo sapiens (human) | ||
| 6 | K, L (G, I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G21290RB) | |||
| 7 | M (B) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
| 8 | N (E) | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) | |||
| 9 | O, P, Q (M, H, D) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 10 | AA, R, S, T, U... (D, C, B, E, F...) | water | water | 18.0 | 797 | Chemie (HOH) |
Sequence modifications
B, A: 331 - 527 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Gly 528 | - | expression tag |
| Ser 529 | - | expression tag |
| His 530 | - | expression tag |
| His 531 | - | expression tag |
| His 532 | - | expression tag |
| His 533 | - | expression tag |
| His 534 | - | expression tag |
| His 535 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 235839.3 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1141.1 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 586.6 | |
| All* | Total formula weight | 237567.0 |
