7MZK
SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 96
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-21 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.953732 |
Spacegroup name | P 1 |
Unit cell lengths | 71.898, 103.561, 106.290 |
Unit cell angles | 103.52, 101.82, 98.20 |
Refinement procedure
Resolution | 49.327 - 2.250 |
R-factor | 0.1983 |
Rwork | 0.197 |
R-free | 0.23510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7mzi |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.15_3459) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.330 | 49.326 | 2.380 |
High resolution limit [Å] | 2.250 | 6.690 | 2.250 |
Rmerge | 0.108 | 0.041 | 0.735 |
Rmeas | 0.126 | 0.048 | 0.858 |
Number of reflections | 133496 | 5107 | 21202 |
<I/σ(I)> | 8.13 | 25.43 | 1.63 |
Completeness [%] | 98.2 | 98.6 | 96.8 |
Redundancy | 3.659 | 3.548 | 3.726 |
CC(1/2) | 0.995 | 0.998 | 0.670 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M Tri-sodium citrate pH 5.5, 10% PEG8000 |