7LSK
Structure of HIV-1 Reverse Transcriptase in complex with DNA, L-dTTP, and CA(2+) ion
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C (A, C) | Reverse transcriptase p66 | polymer | 555 | 63874.1 | 2 | UniProt (P03366) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) Pfam (PF00075) | Human immunodeficiency virus type 1 (HIV-1) | |
2 | B, D (B, D) | Reverse transcriptase p51 | polymer | 429 | 50096.5 | 2 | UniProt (P03366) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) | Human immunodeficiency virus type 1 (HIV-1) | |
3 | E, F (F, E) | DNA/RNA (38-MER) | polymer | 38 | 11748.5 | 2 | synthetic construct | ||
4 | G, H (N, O) | beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose | branched | 342.3 | 2 | In PDB | |||
5 | I, O (A, C) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
6 | J, P (A, C) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
7 | K, L, S (A, D) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
8 | M, Q (A, C) | 1-{2-deoxy-5-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-L-erythro-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione | non-polymer | 482.2 | 2 | Chemie (XRF) | |||
9 | N, R (A, C) | AMMONIUM ION | non-polymer | 18.0 | 2 | Chemie (NH4) | |||
10 | T, U, V, W, X... (A, B, C, D, F...) | water | water | 18.0 | 248 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 555 (UniProt: P03366)
B, D: 1 - 428 (UniProt: P03366)
PDB | External Database | Details |
---|---|---|
Ser 280 | Cys 879 | engineered mutation |
Asn 498 | Asp 1097 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly 0 | - | expression tag |
Ser 280 | Cys 879 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 251438.4 | |
Branched | Number of molecules | 2 |
Total formula weight | 684.6 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1549.0 | |
All* | Total formula weight | 253672.0 |