7LDD
native AMPA receptor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Glutamate receptor 1 | polymer | 907 | 101679.0 | 2 | UniProt (P23818) Pfam (PF01094) Pfam (PF10613) Pfam (PF00060) | Mus musculus (Mouse) | GluR-1,AMPA-selective glutamate receptor 1,GluR-A,GluR-K1,Glutamate receptor ionotropic,AMPA 1,GluA1 |
| 2 | B, D (B, D) | Glutamate receptor | polymer | 883 | 98899.9 | 2 | UniProt (G5E8H1) Pfam (PF01094) Pfam (PF10613) Pfam (PF00060) UniProt (by SIFTS) (P23819) | Mus musculus (Mouse) | |
| 3 | E, F (E, F) | Protein cornichon homolog 2 | polymer | 160 | 18948.4 | 2 | UniProt (O35089) Pfam (PF03311) | Mus musculus (Mouse) | CNIH-2,Cornichon family AMPA receptor auxiliary protein 2,Cornichon-like protein |
| 4 | G, H (G, H) | Voltage-dependent calcium channel gamma-8 subunit | polymer | 423 | 43502.9 | 2 | UniProt (Q8VHW2) Pfam (PF00822) | Mus musculus (Mouse) | Neuronal voltage-gated calcium channel gamma-8 subunit,Transmembrane AMPAR regulatory protein gamma-8,TARP gamma-8 |
| 5 | I, L (I, L) | 11B8 scFv | polymer | 257 | 27511.5 | 2 | Mus musculus | ||
| 6 | J, M (J, M) | 15F1 Fab light chain | polymer | 225 | 25111.7 | 2 | Mus musculus | ||
| 7 | K, N (K, N) | 15F1 Fab heavy chain | polymer | 262 | 27975.4 | 2 | Mus musculus | ||
| 8 | O, P, Q, R, S... (O, P, Q, R, S...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) | |||
| 9 | CA, JA, U, WA (B, C, A, D) | {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid | non-polymer | 409.3 | 4 | Chemie (ZK1) | |||
| 10 | KA, V (C, A) | HEXADECANE | non-polymer | 226.4 | 2 | Chemie (R16) | |||
| 11 | GB, HA, LA, MB, UA... (G, B, C, H, D...) | N-OCTANE | non-polymer | 114.2 | 6 | Chemie (OCT) | |||
| 12 | BA, MA, QA, X (A, C) | HEPTANE | non-polymer | 100.2 | 4 | Chemie (HP6) | |||
| 13 | AB, CB, KB, NA, Y... (F, G, H, C, A...) | DECANE | non-polymer | 142.3 | 6 | Chemie (D10) | |||
| 14 | AA, DA, OA, PA, XA... (A, B, C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 15 | DB, EA, EB, IB, JB... (G, B, H, D) | DODECANE | non-polymer | 170.3 | 6 | Chemie (D12) | |||
| 16 | BB, FA, HB, NB, SA... (F, B, G, H, D...) | TETRADECANE | non-polymer | 198.4 | 6 | Chemie (C14) | |||
| 17 | GA, IA, TA, VA (B, D) | nonane | non-polymer | 128.3 | 4 | Chemie (DD9) | |||
| 18 | FB, LB (G, H) | 6-[2-chloro-6-(trifluoromethoxy)phenyl]-1H-benzimidazol-2-ol | non-polymer | 328.7 | 2 | Chemie (XVD) |
Sequence modifications
B, D: -20 - 862 (UniProt: G5E8H1)
| PDB | External Database | Details |
|---|---|---|
| Arg 586 | Gln 607 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 14 |
| Total formula weight | 687257.7 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 2546.4 | |
| Non-Polymers* | Number of molecules | 46 |
| Total formula weight | 8739.7 | |
| All* | Total formula weight | 698543.8 |
