7LCN
Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G (C, A, K) | Spike glycoprotein | polymer | 1121 | 124124.5 | 3 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | S glycoprotein,E2,Peplomer protein |
| 2 | B, E, H (H, B, M) | DH1050.1 heavy chain | polymer | 223 | 23722.6 | 3 | Homo sapiens (Human) | ||
| 3 | C, F, I (L, D, S) | DH1050.1 light chain | polymer | 216 | 22834.1 | 3 | Homo sapiens (Human) | ||
| 4 | J, K, L, M, N... (N, O, P, Q, R...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 15 | In PDB GlyTouCan (G42666HT) | |||
| 5 | AA, AB, BA, BB, CA... (C, K, A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 33 | Chemie (NAG) |
Sequence modifications
C, A, K: 27 - 1147 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Pro 986 | Lys 986 | conflict |
| Pro 987 | Val 987 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 512043.6 | |
| Branched | Number of molecules | 15 |
| Total formula weight | 6366.0 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 7299.9 | |
| All* | Total formula weight | 525709.4 |
