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7KL3

The crystal structure of the 2009/H1N1/California PA endonuclease mutant E119D bound to RNA oligomer AG*CAUC (*uncleaveable bond, -UC disordered)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Protein PA-Xpolymer19723134.31UniProt (A0A4P2TE19)
UniProt (A0A646SQW7)
UniProt (by SIFTS) (A0A5J6VBC3)
Influenza A virus
2B
(B)
RNA (5'-R(P*AP*GP*CP*A)-3')polymer61875.21synthetic construct
3C
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
4D, E
(A)
SULFATE IONnon-polymer96.12Chemie (SO4)
5F
(B)
ADENOSINE MONOPHOSPHATEnon-polymer347.21Chemie (AMP)
6G
(B)
5'-O-sulfocytidinenon-polymer323.31Chemie (RQA)
7H, I
(A, B)
waterwater18.0120Chemie (HOH)
Sequence modifications
A: 1 - 50 (UniProt: A0A4P2TE19)
PDBExternal DatabaseDetails
Met -19-expression tag
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Gly 51-linker
Gly 52-linker
Ser 53-linker
A: 73 - 196 (UniProt: A0A646SQW7)
PDBExternal DatabaseDetails
Ile 85Thr 85conflict
Asp 119Glu 119engineered mutation
Ser 186Gly 186conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight25009.5
Non-Polymers*Number of molecules5
Total formula weight954.7
All*Total formula weight25964.2
*Water molecules are not included.

248636

PDB entries from 2026-02-04

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