7KJX
Structure of HIV-1 reverse transcriptase initiation complex core with nevirapine
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Reverse transcriptase/ribonuclease H | polymer | 562 | 64705.3 | 1 | UniProt (P03366) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) Pfam (PF00075) In PDB | Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1) | Pr160Gag-Pol |
2 | B | reverse transcriptase p51 subunit | polymer | 442 | 51585.3 | 1 | UniProt (P03366) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) In PDB | Human immunodeficiency virus 1 (HIV-1) | |
3 | C | HIV-1 viral RNA fragment | polymer | 26 | 8437.1 | 1 | Human immunodeficiency virus 1 | ||
4 | D | tRNA lysine 3 fragment with GNRA tetraloop | polymer | 22 | 7030.3 | 1 | Homo sapiens | ||
5 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
6 | A | 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE | non-polymer | 266.3 | 1 | Chemie (NVP) |
Sequence modifications
A: 1 - 560 (UniProt: P03366)
B: 1 - 440 (UniProt: P03366)
PDB | External Database | Details |
---|---|---|
Met -1 | - | expression tag |
Val 0 | - | expression tag |
Cys 258 | Gln 857 | engineered mutation |
Ser 280 | Cys 879 | conflict |
Gln 478 | Glu 1077 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Met -1 | - | expression tag |
Val 0 | - | expression tag |
Ser 280 | Cys 879 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 131758.0 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 290.6 | |
All* | Total formula weight | 132048.6 |