7KJR
Cryo-EM structure of SARS-CoV-2 ORF3a
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | ORF3a protein | polymer | 284 | 32165.9 | 2 | UniProt (P0DTC3) Pfam (PF11289) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | Accessory protein 3a,Protein U274,Protein X1,ORF3a,Protein 3a |
2 | C, D (C, D) | Apolipoprotein A-I | polymer | 210 | 24647.7 | 2 | UniProt (P02647) Pfam (PF01442) | Homo sapiens (Human) | ApoA-I,Apolipoprotein A1,MSPE3D1 |
3 | E, F (A, B) | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | non-polymer | 744.0 | 2 | Chemie (PEE) | |||
4 | G, H (A, B) | water | water | 18.0 | 122 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 275 (UniProt: P0DTC3)
C, D: 23 - 211 (UniProt: P02647)
PDB | External Database | Details |
---|---|---|
Ser 276 | - | expression tag |
Asn 277 | - | expression tag |
Ser 278 | - | expression tag |
Leu 279 | - | expression tag |
Glu 280 | - | expression tag |
Val 281 | - | expression tag |
Leu 282 | - | expression tag |
Phe 283 | - | expression tag |
Gln 284 | - | expression tag |
PDB | External Database | Details |
---|---|---|
His 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
His 8 | - | expression tag |
Asp 9 | - | expression tag |
Tyr 10 | - | expression tag |
Asp 11 | - | expression tag |
Ile 12 | - | expression tag |
Pro 13 | - | expression tag |
Thr 14 | - | expression tag |
Thr 15 | - | expression tag |
Glu 16 | - | expression tag |
Asn 17 | - | expression tag |
Leu 18 | - | expression tag |
Tyr 19 | - | expression tag |
Phe 20 | - | expression tag |
Gln 21 | - | expression tag |
Gly 22 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 113627.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 1488.1 | |
All* | Total formula weight | 115115.2 |