7KJR
Cryo-EM structure of SARS-CoV-2 ORF3a
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | ORF3a protein | polymer | 284 | 32165.9 | 2 | UniProt (P0DTC3) Pfam (PF11289) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | Accessory protein 3a,Protein U274,Protein X1,ORF3a,Protein 3a |
| 2 | C, D (C, D) | Apolipoprotein A-I | polymer | 210 | 24647.7 | 2 | UniProt (P02647) Pfam (PF01442) | Homo sapiens (Human) | ApoA-I,Apolipoprotein A1,MSPE3D1 |
| 3 | E, F (A, B) | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | non-polymer | 744.0 | 2 | Chemie (PEE) PubChem (108229) PubChem (44891344) PubChem (54095275) PubChem (14238554) PubChem (6437392) PubChem (9546744) PubChem (99655478) PubChem (99655479) PubChem (5909904) PubChem (9546757) PubChem (138113035) PubChem (171729549) | |||
| 4 | G, H (A, B) | water | water | 18.0 | 122 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 275 (UniProt: P0DTC3)
C, D: 23 - 211 (UniProt: P02647)
| PDB | External Database | Details |
|---|---|---|
| Ser 276 | - | expression tag |
| Asn 277 | - | expression tag |
| Ser 278 | - | expression tag |
| Leu 279 | - | expression tag |
| Glu 280 | - | expression tag |
| Val 281 | - | expression tag |
| Leu 282 | - | expression tag |
| Phe 283 | - | expression tag |
| Gln 284 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| His 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
| Asp 9 | - | expression tag |
| Tyr 10 | - | expression tag |
| Asp 11 | - | expression tag |
| Ile 12 | - | expression tag |
| Pro 13 | - | expression tag |
| Thr 14 | - | expression tag |
| Thr 15 | - | expression tag |
| Glu 16 | - | expression tag |
| Asn 17 | - | expression tag |
| Leu 18 | - | expression tag |
| Tyr 19 | - | expression tag |
| Phe 20 | - | expression tag |
| Gln 21 | - | expression tag |
| Gly 22 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 113627.2 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 1488.1 | |
| All* | Total formula weight | 115115.2 |






