7K0W
The crystal structure of the 2009/H1N1/California PA endonuclease (construct with truncated loop 51-72) in complex with Baloxavir acid
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Polymerase acidic protein | polymer | 197 | 23148.3 | 1 | UniProt (C3W5S0) | Influenza A virus (strain swl A/California/04/2009 H1N1) | RNA-directed RNA polymerase subunit P2 |
| 2 | B (A) | Baloxavir acid | non-polymer | 483.5 | 1 | Chemie (E4Z) | |||
| 3 | C, D (A) | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
| 4 | E, F (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 5 | G (A) | water | water | 18.0 | 22 | Chemie (HOH) |
Sequence modifications
A: 1 - 196 (UniProt: C3W5S0)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | initiating methionine |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| - | Phe 51 | deletion |
| - | His 52 | deletion |
| - | Phe 53 | deletion |
| - | Ile 54 | deletion |
| - | Asp 55 | deletion |
| - | Glu 56 | deletion |
| - | Arg 57 | deletion |
| - | Gly 58 | deletion |
| - | Glu 59 | deletion |
| - | Ser 60 | deletion |
| - | Ile 61 | deletion |
| - | Ile 62 | deletion |
| - | Val 63 | deletion |
| - | Glu 64 | deletion |
| - | Ser 65 | deletion |
| - | Gly 66 | deletion |
| - | Asp 67 | deletion |
| - | Pro 68 | deletion |
| - | Asn 69 | deletion |
| Gly 51 | Ala 70 | linker |
| Gly 52 | Leu 71 | linker |
| Ser 53 | Leu 72 | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 23148.3 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 785.5 | |
| All* | Total formula weight | 23933.8 |






