7K0W
The crystal structure of the 2009/H1N1/California PA endonuclease (construct with truncated loop 51-72) in complex with Baloxavir acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 89.718, 89.718, 133.763 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.860 - 2.090 |
R-factor | 0.218 |
Rwork | 0.216 |
R-free | 0.24850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5des |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.160 |
High resolution limit [Å] | 2.090 | 4.500 | 2.090 |
Rmerge | 0.090 | 0.055 | 0.562 |
Rmeas | 0.096 | 0.059 | 0.619 |
Rpim | 0.031 | 0.020 | 0.251 |
Total number of observations | 132352 | ||
Number of reflections | 15263 | 1787 | 920 |
<I/σ(I)> | 8.6 | ||
Completeness [%] | 92.5 | 99.9 | 57.7 |
Redundancy | 8.7 | 8.9 | 4.6 |
CC(1/2) | 0.998 | 0.835 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 291 | 0.1M HEPES pH 7.8, 1.0M Ammonium Sulfate, 10mM MnCl2, 10mM MgCl2, 0.5% PVP K15 |