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7JYY

Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA)pUpUpApApA (Cap-0) and S-Adenosylmethionine (SAM).

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
2'-O-methyltransferasepolymer30033556.42UniProt (P0DTD1)
Pfam (PF06460)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)NSP16
2B, D
(B, D)
Non-structural protein 10polymer14115004.12UniProt (P0DTD1)
Pfam (PF09401)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)NSP10
3E, F
(E, F)
RNA (5'-D(*(M7G))-R(P*AP*UP*UP*A)-3')polymer72324.42Severe acute respiratory syndrome coronavirus 2
4G, Q
(A, C)
S-ADENOSYLMETHIONINEnon-polymer398.42Chemie (SAM)
5H, R
(A, C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6I, S, T
(A, C)
SODIUM IONnon-polymer23.03Chemie (NA)
7J
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
8K, L, M, N, U...
(A, C)
FORMIC ACIDnon-polymer46.07Chemie (FMT)
9O, P, X, Y
(B, D)
ZINC IONnon-polymer65.44Chemie (ZN)
10AA, BA, CA, DA, EA...
(B, C, D, E, F...)
waterwater18.0520Chemie (HOH)
Sequence modifications
A, C: 6799 - 7096 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Ser 6797-expression tag
Asn 6798-expression tag
B, D: 4254 - 4392 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Ser 4252-expression tag
Asn 4253-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight101769.9
Non-Polymers*Number of molecules19
Total formula weight1533.7
All*Total formula weight103303.6
*Water molecules are not included.

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PDB entries from 2025-12-24

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