7JPD
Crystal structure of the trimeric full length mature hemagglutinin from influenza A virus A/Fort Monmouth/1/1947
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G, I... (A, B, C, D, E...) | Hemagglutinin HA1 chain | polymer | 329 | 36860.4 | 6 | UniProt (Q20MG8) Pfam (PF00509) | Influenza A virus | |
| 2 | B, D, F, H, J... (a, b, c, d, e...) | Hemagglutinin HA2 chain | polymer | 170 | 19522.7 | 6 | UniProt (Q20MG8) Pfam (PF00509) | Influenza A virus | |
| 3 | M (G) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 4 | N, O, Q, S, U... (H, I, K, M, O...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) | |||
| 5 | P, R, T, V (J, L, N, P) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 4 | In PDB GlyTouCan (G42227JK) | |||
| 6 | AB, CC, DC, MA, NA... (C, E, B, D, F...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 11 | Chemie (NAG) | |||
| 7 | Y (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 8 | AA, AC, AD, BA, BB... (A, D, F, C, d...) | IODIDE ION | non-polymer | 126.9 | 76 | Chemie (IOD) | |||
| 9 | HD, ID, JD, KD, LD... (A, a, B, b, C...) | water | water | 18.0 | 170 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 3 - 329 (UniProt: Q20MG8)
a, b, c, d, e, f: 330 - 494 (UniProt: Q20MG8)
| PDB | External Database | Details |
|---|---|---|
| Gly 1 | - | expression tag |
| Ser 2 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Phe 495 | - | expression tag |
| Leu 496 | - | expression tag |
| Val 497 | - | expression tag |
| Pro 498 | - | expression tag |
| Arg 499 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 338298.8 | |
| Branched | Number of molecules | 11 |
| Total formula weight | 6776.2 | |
| Non-Polymers* | Number of molecules | 88 |
| Total formula weight | 12140.1 | |
| All* | Total formula weight | 357215.1 |
