7JPD
Crystal structure of the trimeric full length mature hemagglutinin from influenza A virus A/Fort Monmouth/1/1947
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Hemagglutinin HA1 chain | polymer | 329 | 36860.4 | 6 | UniProt (Q20MG8) Pfam (PF00509) In PDB | Influenza A virus | |
2 | a, b, c, d, e... | Hemagglutinin HA2 chain | polymer | 170 | 19522.7 | 6 | UniProt (Q20MG8) Pfam (PF00509) In PDB | Influenza A virus | |
3 | G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
4 | H, I, K, M, O... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) | |||
5 | J, L, N, P | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 4 | In PDB GlyTouCan (G42227JK) | |||
6 | C, E, B, D, F... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 11 | Chemie (NAG) | |||
7 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
8 | A, D, F, C, d... | IODIDE ION | non-polymer | 126.9 | 76 | Chemie (IOD) | |||
9 | water | water | 18.0 | 170 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 3 - 329 (UniProt: Q20MG8)
a, b, c, d, e, f: 330 - 494 (UniProt: Q20MG8)
PDB | External Database | Details |
---|---|---|
Gly 1 | - | expression tag |
Ser 2 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Phe 495 | - | expression tag |
Leu 496 | - | expression tag |
Val 497 | - | expression tag |
Pro 498 | - | expression tag |
Arg 499 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 338298.8 | |
Branched | Number of molecules | 11 |
Total formula weight | 6776.2 | |
Non-Polymers* | Number of molecules | 88 |
Total formula weight | 12140.1 | |
All* | Total formula weight | 357215.1 |