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7JHS

Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J5 immobile Holliday junction with R3 symmetry

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*CP*GP*A)-3')polymer123681.41synthetic construct
2B
(B)
DNA (5'-D(P*CP*GP*GP*GP*AP*CP*TP*CP*A)-3')polymer92740.81synthetic construct
3C
(C)
DNA (5'-D(P*TP*CP*GP*CP*CP*G)-3')polymer61785.21synthetic construct
4D
(D)
DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*CP*GP*GP*TP*CP*TP*GP*C)-3')polymer154592.01synthetic construct
5E, F, G
(A, C)
CACODYLATE IONnon-polymer137.03Chemie (CAC)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight12799.4
Non-Polymers*Number of molecules3
Total formula weight411.0
All*Total formula weight13210.4
*Water molecules are not included.

243911

PDB entries from 2025-10-29

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