7FQH
Crystal Structure of human Legumain in complex with (2S)-N-[(3S)-5-amino-5-oxopent-1-yn-3-yl]-1-[1-[4-(cyclopropylmethoxy)phenyl]cyclopropanecarbonyl]pyrrolidine-2-carboxamide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, D | Legumain | polymer | 444 | 50877.7 | 3 | UniProt (Q99538) Pfam (PF01650) Pfam (PF20985) In PDB | Homo sapiens (human) | Asparaginyl endopeptidase,Protease,cysteine 1 |
2 | A, B, D | N-[(3S)-5-amino-5-oxopent-1-en-3-yl]-1-{1-[4-(cyclopropylmethoxy)phenyl]cyclopropane-1-carbonyl}-L-prolinamide | non-polymer | 425.5 | 3 | Chemie (WR9) | |||
3 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
4 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
5 | water | water | 18.0 | 88 | Chemie (HOH) |
Sequence modifications
A, B, D: 18 - 433 (UniProt: Q99538)
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Lys 1 | - | expression tag |
Leu 2 | - | expression tag |
Cys 3 | - | expression tag |
Ile 4 | - | expression tag |
Leu 5 | - | expression tag |
Leu 6 | - | expression tag |
Ala 7 | - | expression tag |
Val 8 | - | expression tag |
Val 9 | - | expression tag |
Ala 10 | - | expression tag |
Phe 11 | - | expression tag |
Val 12 | - | expression tag |
Gly 13 | - | expression tag |
Leu 14 | - | expression tag |
Ser 15 | - | expression tag |
Leu 16 | - | expression tag |
Gly 17 | - | expression tag |
Snn 147 | Asp 147 | conflict |
Gln 272 | Asn 272 | conflict |
Val 434 | - | expression tag |
Asp 435 | - | expression tag |
His 436 | - | expression tag |
His 437 | - | expression tag |
His 438 | - | expression tag |
His 439 | - | expression tag |
His 440 | - | expression tag |
His 441 | - | expression tag |
His 442 | - | expression tag |
His 443 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 152633.0 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1843.1 | |
All* | Total formula weight | 154476.1 |