7EY0
Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-813 Fab and BD-744 Fab
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | BD-744H | polymer | 225 | 23910.7 | 1 | Homo sapiens | ||
2 | H | BD-813H | polymer | 223 | 23841.8 | 1 | Homo sapiens | ||
3 | L | BD-813L | polymer | 215 | 23462.1 | 1 | Homo sapiens | ||
4 | R, N | Spike glycoprotein | polymer | 1285 | 142066.1 | 2 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | S glycoprotein,E2,Peplomer protein |
5 | B | BD-744L | polymer | 213 | 23014.6 | 1 | Homo sapiens |
Sequence modifications
R, N: 4 - 1207 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Phe 21 | Leu 18 | conflict |
Ala 83 | Asp 80 | conflict |
Gly 218 | Asp 215 | conflict |
- | Leu 241 | deletion |
- | Leu 242 | deletion |
- | Ala 243 | deletion |
Asn 417 | Lys 417 | conflict |
Lys 484 | Glu 484 | conflict |
Tyr 501 | Asn 501 | conflict |
Gly 614 | Asp 614 | conflict |
Gly 682 | Arg 682 | conflict |
Ser 683 | Arg 683 | conflict |
Ser 685 | Arg 685 | conflict |
Val 701 | Ala 701 | conflict |
Pro 817 | Phe 817 | conflict |
Pro 892 | Ala 892 | conflict |
Pro 899 | Ala 899 | conflict |
Pro 942 | Ala 942 | conflict |
Pro 986 | Lys 986 | conflict |
Pro 987 | Val 987 | conflict |
Gln 1208 | - | expression tag |
Gly 1209 | - | expression tag |
Ser 1210 | - | expression tag |
Gly 1211 | - | expression tag |
Tyr 1212 | - | expression tag |
Ile 1213 | - | expression tag |
Pro 1214 | - | expression tag |
Glu 1215 | - | expression tag |
Ala 1216 | - | expression tag |
Pro 1217 | - | expression tag |
Arg 1218 | - | expression tag |
Asp 1219 | - | expression tag |
Gly 1220 | - | expression tag |
Gln 1221 | - | expression tag |
Ala 1222 | - | expression tag |
Tyr 1223 | - | expression tag |
Val 1224 | - | expression tag |
Arg 1225 | - | expression tag |
Lys 1226 | - | expression tag |
Asp 1227 | - | expression tag |
Gly 1228 | - | expression tag |
Glu 1229 | - | expression tag |
Trp 1230 | - | expression tag |
Val 1231 | - | expression tag |
Leu 1232 | - | expression tag |
Leu 1233 | - | expression tag |
Ser 1234 | - | expression tag |
Thr 1235 | - | expression tag |
Phe 1236 | - | expression tag |
Leu 1237 | - | expression tag |
Gly 1238 | - | expression tag |
Arg 1239 | - | expression tag |
Ser 1240 | - | expression tag |
Leu 1241 | - | expression tag |
Glu 1242 | - | expression tag |
Val 1243 | - | expression tag |
Leu 1244 | - | expression tag |
Phe 1245 | - | expression tag |
Gln 1246 | - | expression tag |
Gly 1247 | - | expression tag |
Pro 1248 | - | expression tag |
Gly 1249 | - | expression tag |
His 1250 | - | expression tag |
His 1251 | - | expression tag |
His 1252 | - | expression tag |
His 1253 | - | expression tag |
His 1254 | - | expression tag |
His 1255 | - | expression tag |
His 1256 | - | expression tag |
His 1257 | - | expression tag |
Ser 1258 | - | expression tag |
Ala 1259 | - | expression tag |
Trp 1260 | - | expression tag |
Ser 1261 | - | expression tag |
His 1262 | - | expression tag |
Pro 1263 | - | expression tag |
Gln 1264 | - | expression tag |
Phe 1265 | - | expression tag |
Glu 1266 | - | expression tag |
Lys 1267 | - | expression tag |
Gly 1268 | - | expression tag |
Gly 1269 | - | expression tag |
Gly 1270 | - | expression tag |
Ser 1271 | - | expression tag |
Gly 1272 | - | expression tag |
Gly 1273 | - | expression tag |
Gly 1274 | - | expression tag |
Gly 1275 | - | expression tag |
Ser 1276 | - | expression tag |
Gly 1277 | - | expression tag |
Gly 1278 | - | expression tag |
Ser 1279 | - | expression tag |
Ala 1280 | - | expression tag |
Trp 1281 | - | expression tag |
Ser 1282 | - | expression tag |
His 1283 | - | expression tag |
Pro 1284 | - | expression tag |
Gln 1285 | - | expression tag |
Phe 1286 | - | expression tag |
Glu 1287 | - | expression tag |
Lys 1288 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 378361.3 | |
All* | Total formula weight | 378361.3 |