7EC3
Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | Glycosyl transferase, group 1 family protein | polymer | 505 | 59631.3 | 2 | UniProt (A0A0H2XGN0) Pfam (PF00534) UniProt (by SIFTS) (Q2G0L2) In PDB | Staphylococcus aureus (strain USA300) | |
2 | D, G | 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-35)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-65)]5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE | polymer | 8 | 826.7 | 2 | synthetic construct | ||
3 | A, C | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 2 | Chemie (UDP) | |||
4 | A, C, D, G | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 5 | Chemie (NAG) | |||
5 | water | water | 18.0 | 24 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 496 (UniProt: A0A0H2XGN0)
PDB | External Database | Details |
---|---|---|
Ala 0 | - | expression tag |
Leu 497 | - | expression tag |
Glu 498 | - | expression tag |
His 499 | - | expression tag |
His 500 | - | expression tag |
His 501 | - | expression tag |
His 502 | - | expression tag |
His 503 | - | expression tag |
His 504 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 120916.0 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1914.4 | |
All* | Total formula weight | 122830.3 |