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7EC3

Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, CGlycosyl transferase, group 1 family proteinpolymer50559631.32UniProt (A0A0H2XGN0)
Pfam (PF00534)
UniProt (by SIFTS) (Q2G0L2)
In PDB
Staphylococcus aureus (strain USA300)
2D, G2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-35)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-65)]5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINEpolymer8826.72synthetic construct
3A, CURIDINE-5'-DIPHOSPHATEnon-polymer404.22Chemie (UDP)
4A, C, D, G2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.25Chemie (NAG)
5waterwater18.024Chemie (HOH)
Sequence modifications
A, C: 1 - 496 (UniProt: A0A0H2XGN0)
PDBExternal DatabaseDetails
Ala 0-expression tag
Leu 497-expression tag
Glu 498-expression tag
His 499-expression tag
His 500-expression tag
His 501-expression tag
His 502-expression tag
His 503-expression tag
His 504-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight120916.0
Non-Polymers*Number of molecules7
Total formula weight1914.4
All*Total formula weight122830.3
*Water molecules are not included.

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PDB entries from 2024-05-15

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