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7EC3

Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005737cellular_componentcytoplasm
A0016757molecular_functionglycosyltransferase activity
C0000166molecular_functionnucleotide binding
C0005737cellular_componentcytoplasm
C0016757molecular_functionglycosyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue UDP A 601
ChainResidue
AGLY15
ANAG602
AHOH705
AARG329
ALYS334
ATYR358
APHE385
ALEU386
ALEU410
AALA411
AGLU414

site_idAC2
Number of Residues11
Detailsbinding site for residue NAG A 602
ChainResidue
AALA19
AHIS246
ASER247
AVAL304
AMET405
AGLU406
AGLY407
APHE408
ASER409
ALEU410
AUDP601

site_idAC3
Number of Residues14
Detailsbinding site for residue UDP C 601
ChainResidue
CGLY15
CLYS18
CVAL327
CARG329
CLYS334
CTYR358
CPHE385
CLEU386
CLEU389
CGLU406
CLEU410
CALA411
CGLU414
CNAG602

site_idAC4
Number of Residues12
Detailsbinding site for residue NAG C 602
ChainResidue
CILE16
CALA19
CHIS246
CSER247
CVAL304
CMET405
CGLU406
CGLY407
CPHE408
CSER409
CLEU410
CUDP601

site_idAC5
Number of Residues6
Detailsbinding site for residue NAG D 100
ChainResidue
ATYR103
AARG132
CGLU354
CTYR381
DASP2
DSER3

site_idAC6
Number of Residues5
Detailsbinding site for residue NAG D 101
ChainResidue
AASP99
ATYR111
DASP4
DSER7
DASP8

site_idAC7
Number of Residues4
Detailsbinding site for residue NAG G 101
ChainResidue
CTYR111
GASP4
GSER7
GASP8

219869

PDB entries from 2024-05-15

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