7DLK
Crystal Structure of veratryl alcohol bound Dye Decolorizing peroxidase from Bacillus subtilis
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Deferrochelatase/peroxidase | polymer | 363 | 40235.3 | 6 | UniProt (A0A6G2J275) Pfam (PF04261) Pfam (PF20628) UniProt (by SIFTS) (P39597) | Bacillus subtilis | |
| 2 | EA, G, KA, O, S... (E, A, F, B, C...) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 6 | Chemie (HEM) | |||
| 3 | AA, FA, H, LA, P... (D, E, A, F, B...) | OXYGEN MOLECULE | non-polymer | 32.0 | 6 | Chemie (OXY) | |||
| 4 | I, V (A, C) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 2 | Chemie (MPD) | |||
| 5 | BA, HA, IA, J, K... (D, E, A, F, B...) | GLYCEROL | non-polymer | 92.1 | 13 | Chemie (GOL) | |||
| 6 | CA, DA, JA, M, R... (D, E, A, B, F...) | CHLORIDE ION | non-polymer | 35.5 | 8 | Chemie (CL) | |||
| 7 | N (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 8 | GA, U (E, C) | Veratryl alcohol | non-polymer | 168.2 | 2 | Chemie (VOH) | |||
| 9 | MA (F) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
| 10 | TA, UA, VA, WA, XA... (A, B, C, D, E...) | water | water | 18.0 | 1923 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 2 - 363 (UniProt: A0A6G2J275)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Ser 93 | Gly 146 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 241411.9 | |
| Non-Polymers* | Number of molecules | 39 |
| Total formula weight | 6277.8 | |
| All* | Total formula weight | 247689.7 |
