7D4F
Structure of COVID-19 RNA-dependent RNA polymerase bound to suramin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B, G | Non-structural protein 8 | polymer | 199 | 22034.2 | 2 | UniProt (P0DTD1) Pfam (PF08717) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | nsp8 |
2 | C | Non-structural protein 7 | polymer | 84 | 9380.0 | 1 | UniProt (P0DTD1) Pfam (PF08716) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | nsp7 |
3 | A | RNA-directed RNA polymerase | polymer | 943 | 107965.3 | 1 | UniProt (P0DTD1) Pfam (PF06478) Pfam (PF00680) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | Pol,RdRp,Non-structural protein 12,nsp12 |
4 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
5 | A | 8-(3-(3-aminobenzamido)-4-methylbenzamido)naphthalene-1,3,5-trisulfonic acid | non-polymer | 635.6 | 2 | Chemie (H3U) |
Sequence modifications
B, G: 1 - 198 (UniProt: P0DTD1)
C: 1 - 83 (UniProt: P0DTD1)
A: 1 - 932 (UniProt: P0DTD1)
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Gly 933 | - | expression tag |
Gly 934 | - | expression tag |
Ser 935 | - | expression tag |
Glu 936 | - | expression tag |
Asn 937 | - | expression tag |
Leu 938 | - | expression tag |
Tyr 939 | - | expression tag |
Phe 940 | - | expression tag |
Gln 941 | - | expression tag |
Gly 942 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 161413.7 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 1402.1 | |
All* | Total formula weight | 162815.8 |