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7D4F

Structure of COVID-19 RNA-dependent RNA polymerase bound to suramin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1B, GNon-structural protein 8polymer19922034.22UniProt (P0DTD1)
Pfam (PF08717)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)nsp8
2CNon-structural protein 7polymer849380.01UniProt (P0DTD1)
Pfam (PF08716)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)nsp7
3ARNA-directed RNA polymerasepolymer943107965.31UniProt (P0DTD1)
Pfam (PF06478)
Pfam (PF00680)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)Pol,RdRp,Non-structural protein 12,nsp12
4AZINC IONnon-polymer65.42Chemie (ZN)
5A8-(3-(3-aminobenzamido)-4-methylbenzamido)naphthalene-1,3,5-trisulfonic acidnon-polymer635.62Chemie (H3U)
Sequence modifications
B, G: 1 - 198 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
C: 1 - 83 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
A: 1 - 932 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Gly 933-expression tag
Gly 934-expression tag
Ser 935-expression tag
Glu 936-expression tag
Asn 937-expression tag
Leu 938-expression tag
Tyr 939-expression tag
Phe 940-expression tag
Gln 941-expression tag
Gly 942-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight161413.7
Non-Polymers*Number of molecules4
Total formula weight1402.1
All*Total formula weight162815.8
*Water molecules are not included.

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PDB entries from 2024-04-17

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