7CYM
Crystal structure of LI-Cadherin EC1-4
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Cadherin-17 | polymer | 440 | 49874.7 | 2 | UniProt (Q12864) Pfam (PF00028) In PDB | Homo sapiens (Human) | LI-cadherin EC1-4 |
2 | C, E | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 2 | In PDB GlyTouCan (G22573RC) | |||
3 | D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
4 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
5 | A, B | CALCIUM ION | non-polymer | 40.1 | 12 | Chemie (CA) | |||
6 | water | water | 18.0 | 33 | Chemie (HOH) |
Sequence modifications
A, B: 23 - 441 (UniProt: Q12864)
PDB | External Database | Details |
---|---|---|
Glu 442 | - | expression tag |
Gln 443 | - | expression tag |
Lys 444 | - | expression tag |
Leu 445 | - | expression tag |
Ile 446 | - | expression tag |
Ser 447 | - | expression tag |
Glu 448 | - | expression tag |
Glu 449 | - | expression tag |
Asp 450 | - | expression tag |
Leu 451 | - | expression tag |
Asn 452 | - | expression tag |
Ser 453 | - | expression tag |
Ala 454 | - | expression tag |
Val 455 | - | expression tag |
Asp 456 | - | expression tag |
His 457 | - | expression tag |
His 458 | - | expression tag |
His 459 | - | expression tag |
His 460 | - | expression tag |
His 461 | - | expression tag |
His 462 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 99749.3 | |
Branched | Number of molecules | 3 |
Total formula weight | 1921.8 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 1144.6 | |
All* | Total formula weight | 102815.7 |