Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein | polymer | 1116 | 122402.0 | 3 | UniProt (P15423) Pfam (PF01600) Pfam (PF19209) Pfam (PF01601) In PDB | Human coronavirus 229E (HCoV-229E) | S glycoprotein,E2,Peplomer protein |
2 | D, H, L | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 3 | In PDB GlyTouCan (G89619KY) | |||
3 | E, G, I, K, M... | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 6 | In PDB GlyTouCan (G15407YE) | |||
4 | F, J, N | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
5 | A, C, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 48 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 1116 (UniProt: P15423)
PDB | External Database | Details |
---|---|---|
Met 642 | Arg 642 | variant |
Arg 681 | Thr 681 | variant |
Ala 765 | Val 765 | variant |
Ser 775 | Ala 775 | variant |
Ile 871 | Thr 871 | variant |
Leu 937 | Ile 937 | variant |
Arg 971 | Thr 971 | variant |
Ile 1005 | Met 1005 | variant |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 367206.0 | |
Branched | Number of molecules | 12 |
Total formula weight | 8497.8 | |
Non-Polymers* | Number of molecules | 48 |
Total formula weight | 10618.0 | |
All* | Total formula weight | 386321.8 |