7CY4
Crystal Structure of CMD1 in apo form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1 | polymer | 917 | 98913.5 | 1 | UniProt (A0A140NCD0) UniProt (A0A2K3D5Z7) Pfam (PF01547) UniProt (by SIFTS) (P0AEX9) | Escherichia coli (strain B / BL21-DE3) | dioxygenase, 5mC-modifying enzyme 1,Ten-eleven translocation 1 gene protein homolog,CrTET1 |
| 2 | B (A) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 3 | C (A) | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) | |||
| 4 | D (A) | water | water | 18.0 | 223 | Chemie (HOH) |
Sequence modifications
A: -372 - -7 (UniProt: A0A140NCD0)
A: 1 - 532 (UniProt: A0A2K3D5Z7)
| PDB | External Database | Details |
|---|---|---|
| Met -373 | - | initiating methionine |
| Ala -291 | Asp 108 | engineered mutation |
| Ala -290 | Lys 109 | engineered mutation |
| Ala -201 | Glu 198 | engineered mutation |
| Ala -200 | Asn 199 | engineered mutation |
| Ala -134 | Lys 265 | engineered mutation |
| Ala -14 | Glu 385 | engineered mutation |
| Ala -11 | Lys 388 | engineered mutation |
| Ala -10 | Asp 389 | engineered mutation |
| Asn -6 | - | linker |
| Ala -5 | - | linker |
| Ala -4 | - | linker |
| Arg -3 | - | linker |
| Ala -2 | - | linker |
| Ala -1 | - | linker |
| Ala 0 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Ala 533 | - | expression tag |
| Ala 534 | - | expression tag |
| Ala 535 | - | expression tag |
| Leu 536 | - | expression tag |
| Glu 537 | - | expression tag |
| His 538 | - | expression tag |
| His 539 | - | expression tag |
| His 540 | - | expression tag |
| His 541 | - | expression tag |
| His 542 | - | expression tag |
| His 543 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 98913.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 248.0 | |
| All* | Total formula weight | 99161.4 |






