7BVH
Crystal structure of arabinosyltransferase EmbC2-AcpM2 complex from Mycobacterium smegmatis complexed with di-arabinose
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | Integral membrane indolylacetylinositol arabinosyltransferase EmbC | polymer | 1113 | 119999.4 | 2 | UniProt (I7FMU5) Pfam (PF17689) Pfam (PF04602) Pfam (PF14896) UniProt (by SIFTS) (A0R612) | Mycolicibacterium smegmatis MC2 155 | arabinosyltransferase EmbC |
2 | C, D (C, D) | Meromycolate extension acyl carrier protein | polymer | 99 | 10743.9 | 2 | UniProt (A0R0B3) Pfam (PF00550) | Mycolicibacterium smegmatis MC2 155 | ACP |
3 | E, J (E, J) | alpha-D-arabinofuranose-(1-5)-alpha-D-arabinofuranose | branched | 282.2 | 2 | In PDB GlyTouCan (G34232WB) | |||
4 | F, G, H, I, K... (F, G, H, I, K...) | alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose | branched | 342.3 | 6 | In PDB BIRD (PRD_900018) GlyTouCan (G66120GK) | beta-maltose | ||
5 | M, Q (A, B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
6 | N, R (A, B) | PHOSPHATE ION | non-polymer | 95.0 | 2 | Chemie (PO4) | |||
7 | O, P, S, T (A, B) | alpha-D-arabinofuranose | non-polymer | 150.1 | 4 | Chemie (BXY) |
Sequence modifications
A, B: 1 - 1074 (UniProt: I7FMU5)
PDB | External Database | Details |
---|---|---|
Met -12 | - | initiating methionine |
Pro -11 | - | expression tag |
Glu -10 | - | expression tag |
Val -9 | - | expression tag |
Val -8 | - | expression tag |
Gly -7 | - | expression tag |
Ser -6 | - | expression tag |
Tyr -5 | - | expression tag |
Phe -4 | - | expression tag |
Gln -3 | - | expression tag |
Ser -2 | - | expression tag |
Asn -1 | - | expression tag |
Ala 0 | - | expression tag |
His 1075 | - | expression tag |
Leu 1076 | - | expression tag |
Gly 1077 | - | expression tag |
Gly 1078 | - | expression tag |
Ile 1079 | - | expression tag |
Lys 1080 | - | expression tag |
Ala 1081 | - | expression tag |
Phe 1082 | - | expression tag |
Leu 1083 | - | expression tag |
Glu 1084 | - | expression tag |
Val 1085 | - | expression tag |
Leu 1086 | - | expression tag |
Phe 1087 | - | expression tag |
Gln 1088 | - | expression tag |
Gly 1089 | - | expression tag |
Pro 1090 | - | expression tag |
His 1091 | - | expression tag |
His 1092 | - | expression tag |
His 1093 | - | expression tag |
His 1094 | - | expression tag |
His 1095 | - | expression tag |
His 1096 | - | expression tag |
His 1097 | - | expression tag |
His 1098 | - | expression tag |
His 1099 | - | expression tag |
His 1100 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 261486.6 | |
Branched | Number of molecules | 8 |
Total formula weight | 2618.3 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 870.6 | |
All* | Total formula weight | 264975.5 |