7BV2
The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | RNA-directed RNA polymerase | polymer | 951 | 109070.4 | 1 | UniProt (P0DTD1) Pfam (PF06478) Pfam (PF00680) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | pp1ab,ORF1ab polyprotein,Pol,RdRp,Non-structural protein 12,nsp12 |
| 2 | B (B) | Non-structural protein 8 | polymer | 207 | 23139.4 | 1 | UniProt (P0DTD1) Pfam (PF08717) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | pp1ab,ORF1ab polyprotein,nsp8 |
| 3 | C (C) | Non-structural protein 7 | polymer | 92 | 10485.2 | 1 | UniProt (P0DTD1) Pfam (PF08716) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | pp1ab,ORF1ab polyprotein,nsp7 |
| 4 | D (P) | Primer | polymer | 20 | 6410.8 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
| 5 | E (T) | Templete | polymer | 30 | 9358.5 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
| 6 | F, G (A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 7 | H (A) | PYROPHOSPHATE 2- | non-polymer | 176.0 | 1 | Chemie (POP) | |||
| 8 | I, J (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 9 | K (P) | [(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate | non-polymer | 371.2 | 1 | Chemie (F86) | |||
| 10 | L (A) | water | water | 18.0 | 5 | Chemie (HOH) |
Sequence modifications
A: 1 - 932 (UniProt: P0DTD1)
B: 1 - 198 (UniProt: P0DTD1)
C: 1 - 83 (UniProt: P0DTD1)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Gly 933 | - | expression tag |
| Gly 934 | - | expression tag |
| Ser 935 | - | expression tag |
| Glu 936 | - | expression tag |
| Asn 937 | - | expression tag |
| Leu 938 | - | expression tag |
| Tyr 939 | - | expression tag |
| Phe 940 | - | expression tag |
| Gln 941 | - | expression tag |
| Gly 942 | - | expression tag |
| His 943 | - | expression tag |
| His 944 | - | expression tag |
| His 945 | - | expression tag |
| His 946 | - | expression tag |
| His 947 | - | expression tag |
| His 948 | - | expression tag |
| His 949 | - | expression tag |
| His 950 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| His 199 | - | expression tag |
| His 200 | - | expression tag |
| His 201 | - | expression tag |
| His 202 | - | expression tag |
| His 203 | - | expression tag |
| His 204 | - | expression tag |
| His 205 | - | expression tag |
| His 206 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| His 84 | - | expression tag |
| His 85 | - | expression tag |
| His 86 | - | expression tag |
| His 87 | - | expression tag |
| His 88 | - | expression tag |
| His 89 | - | expression tag |
| His 90 | - | expression tag |
| His 91 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 158464.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 726.6 | |
| All* | Total formula weight | 159190.9 |






