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7BV2

The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ARNA-directed RNA polymerasepolymer951109070.41UniProt (P0DTD1)
Pfam (PF06478)
Pfam (PF00680)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)pp1ab,ORF1ab polyprotein,Pol,RdRp,Non-structural protein 12,nsp12
2BNon-structural protein 8polymer20723139.41UniProt (P0DTD1)
Pfam (PF08717)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)pp1ab,ORF1ab polyprotein,nsp8
3CNon-structural protein 7polymer9210485.21UniProt (P0DTD1)
Pfam (PF08716)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)pp1ab,ORF1ab polyprotein,nsp7
4PPrimerpolymer206410.81Severe acute respiratory syndrome coronavirus 2
5TTempletepolymer309358.51Severe acute respiratory syndrome coronavirus 2
6AZINC IONnon-polymer65.42Chemie (ZN)
7APYROPHOSPHATE 2-non-polymer176.01Chemie (POP)
8AMAGNESIUM IONnon-polymer24.32Chemie (MG)
9P[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphatenon-polymer371.21Chemie (F86)
10waterwater18.05Chemie (HOH)
Sequence modifications
A: 1 - 932 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Gly 933-expression tag
Gly 934-expression tag
Ser 935-expression tag
Glu 936-expression tag
Asn 937-expression tag
Leu 938-expression tag
Tyr 939-expression tag
Phe 940-expression tag
Gln 941-expression tag
Gly 942-expression tag
His 943-expression tag
His 944-expression tag
His 945-expression tag
His 946-expression tag
His 947-expression tag
His 948-expression tag
His 949-expression tag
His 950-expression tag
B: 1 - 198 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
His 199-expression tag
His 200-expression tag
His 201-expression tag
His 202-expression tag
His 203-expression tag
His 204-expression tag
His 205-expression tag
His 206-expression tag
C: 1 - 83 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
His 84-expression tag
His 85-expression tag
His 86-expression tag
His 87-expression tag
His 88-expression tag
His 89-expression tag
His 90-expression tag
His 91-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight158464.3
Non-Polymers*Number of molecules6
Total formula weight726.6
All*Total formula weight159190.9
*Water molecules are not included.

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PDB entries from 2024-04-24

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