7B6V

Sheep Polyomavirus VP1 in complex with 5 mM Forssman antigen pentaose and 20 mM 3'-sialyllactosamine

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E... (AAA, BBB, CCC, DDD, EEE...)	Capsid protein VP1	polymer	276	30577.4	10	UniProt (A0A0E3ZCF3) UniProt (by SIFTS) (A0ACD6B8T1)	Sheep polyomavirus 1
2	K, L, N, O, P... (AaA, BaB, DaD, EaE, FaF...)	2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose	branched		748.7	9	In PDB GlyTouCan (G88796WA)
3	M (CaC)	2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose	branched		910.8	1	In PDB GlyTouCan (G80062GG)
4	DA, GA, JA, U, Y (FFF, HHH, III, AAA, DDD)	N-acetyl-alpha-neuraminic acid	non-polymer		309.3	5	Chemie (SIA)
5	CA, EA, FA, IA, KA... (EEE, FFF, GGG, HHH, III...)	MAGNESIUM ION	non-polymer		24.3	10	Chemie (MG) PubChem (888)
6	AA, BA, HA (EEE, HHH)	1,2-ETHANEDIOL	non-polymer		62.1	3	Chemie (EDO)
7	LA (JJJ)	TRIETHYLENE GLYCOL	non-polymer		150.2	1	Chemie (PGE)
8	MA (JJJ)	DI(HYDROXYETHYL)ETHER	non-polymer		106.1	1	Chemie (PEG) PubChem (8117)
9	OA, PA, QA, RA, SA... (AAA, BBB, CCC, DDD, EEE...)	water	water		18.0	2352	Chemie (HOH)

Sequence modifications

AAA, BBB, CCC, DDD, EEE, FFF, GGG, HHH, III, JJJ: 20 - 291 (UniProt: A0A0E3ZCF3)

PDB	External Database	Details
Gly 16	-	expression tag
Ser 17	-	expression tag
His 18	-	expression tag
Met 19	-	expression tag
Ser 95	Cys 96	conflict

Contents of the asymmetric unit

Polymers	Number of chains	10
	Total formula weight	305774.3
Branched	Number of molecules	10
	Total formula weight	7649.0
Non-Polymers*	Number of molecules	20
	Total formula weight	2231.9
All*	Total formula weight	315655.2

*Water molecules are not included.