Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7B6V

Sheep Polyomavirus VP1 in complex with 5 mM Forssman antigen pentaose and 20 mM 3'-sialyllactosamine

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]93
Detector technologyPIXEL
Collection date2019-10-19
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.00004
Spacegroup nameP 31
Unit cell lengths130.404, 130.404, 221.221
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.846 - 1.798
Rwork0.152
R-free0.17700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6y61
RMSD bond length0.009
RMSD bond angle1.721
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.8501.910
High resolution limit [Å]1.7981.800
Rmeas0.1621.273
Number of reflections39046962546
<I/σ(I)>11.021.51
Completeness [%]99.8
Redundancy9.9
CC(1/2)0.9970.471
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293KSCN, PEG 3350

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon