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7B1K

Crystal structure of phosphatidyl serine synthase (PSS) in the closed conformation with bound citrate.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
CDP-diacylglycerol--serine O-phosphatidyltransferasepolymer22524713.42UniProt (Q58609)
Pfam (PF01066)
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)Phosphatidylserine synthase
2C, N
(A, B)
5'-O-[(R)-{[(S)-{(2R)-2,3-bis[(9E)-octadec-9-enoyloxy]propoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidinenon-polymer1006.12Chemie (58A)
3D, O
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
4E, P
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5F, G, Q, R
(A, B)
CHLORIDE IONnon-polymer35.54Chemie (CL)
6H, S, T
(A, B)
CITRATE ANIONnon-polymer189.13Chemie (FLC)
7I, W
(A, B)
SODIUM IONnon-polymer23.02Chemie (NA)
8J, K, L, M, U...
(A, B)
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoatenon-polymer356.56Chemie (OLC)
9X, Y
(A, B)
waterwater18.029Chemie (HOH)
Sequence modifications
A, B: 1 - 201 (UniProt: Q58609)
PDBExternal DatabaseDetails
Met -21-initiating methionine
Gly -20-expression tag
Ser -19-expression tag
Ser -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
Ser -11-expression tag
Ser -10-expression tag
Gly -9-expression tag
Leu -8-expression tag
Glu -7-expression tag
Val -6-expression tag
Leu -5-expression tag
Phe -4-expression tag
Gln -3-expression tag
Gly -2-expression tag
Pro -1-expression tag
His 0-expression tag
Leu 202-expression tag
Glu 203-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight49426.8
Non-Polymers*Number of molecules21
Total formula weight5035.4
All*Total formula weight54462.2
*Water molecules are not included.

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PDB entries from 2025-07-02

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