7AU7
Crystal structure of Nod Factor Perception ectodomain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Serine/threonine receptor-like kinase NFP | polymer | 263 | 29259.2 | 1 | UniProt (Q0GXS4) | Medicago truncatula (Barrel medic) | RLK NFP,Nod factor perception protein,Nod-factor receptor 5 |
| 2 | B (C) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 3 | C, E (D, G) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | D (E) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 5 | F, G (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 6 | H (A) | water | water | 18.0 | 53 | Chemie (HOH) |
Sequence modifications
A: 27 - 246 (UniProt: Q0GXS4)
| PDB | External Database | Details |
|---|---|---|
| Met -10 | - | initiating methionine |
| Leu -9 | - | expression tag |
| Leu -8 | - | expression tag |
| Val -7 | - | expression tag |
| Asn -6 | - | expression tag |
| Gln -5 | - | expression tag |
| Ser -4 | - | expression tag |
| His -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Phe 0 | - | expression tag |
| Asn 1 | - | expression tag |
| Lys 2 | - | expression tag |
| Glu 3 | - | expression tag |
| His 4 | - | expression tag |
| Thr 5 | - | expression tag |
| Ser 6 | - | expression tag |
| Lys 7 | - | expression tag |
| Met 8 | - | expression tag |
| Val 9 | - | expression tag |
| Ser 10 | - | expression tag |
| Ala 11 | - | expression tag |
| Ile 12 | - | expression tag |
| Val 13 | - | expression tag |
| Leu 14 | - | expression tag |
| Tyr 15 | - | expression tag |
| Val 16 | - | expression tag |
| Leu 17 | - | expression tag |
| Leu 18 | - | expression tag |
| Ala 19 | - | expression tag |
| Ala 20 | - | expression tag |
| Ala 21 | - | expression tag |
| Ala 22 | - | expression tag |
| His 23 | - | expression tag |
| Ser 24 | - | expression tag |
| Ala 25 | - | expression tag |
| Phe 26 | - | expression tag |
| His 247 | - | expression tag |
| His 248 | - | expression tag |
| His 249 | - | expression tag |
| His 250 | - | expression tag |
| His 251 | - | expression tag |
| His 252 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 29259.2 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2184.0 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 442.4 | |
| All* | Total formula weight | 31885.6 |
