7ASE
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (f) | kDDX60 | polymer | 2174 | 246749.9 | 1 | UniProt (Q4E5Z1) Pfam (PF23002) Pfam (PF00270) Pfam (PF00271) | Trypanosoma cruzi | |
| 2 | B (1) | initiator tRNA-Met | polymer | 75 | 24255.5 | 1 | Trypanosoma cruzi | ||
| 3 | C (0) | 18S | polymer | 2319 | 746696.1 | 1 | GenBank (320364483) | Trypanosoma cruzi | |
| 4 | D (y) | 40S ribosomal protein S24 | polymer | 137 | 15706.7 | 1 | UniProt (Q4DW38) Pfam (PF01282) | Trypanosoma cruzi | |
| 5 | E (s) | Elongation initiation factor 2 alpha subunit, putative | polymer | 418 | 47700.2 | 1 | UniProt (Q4E620) Pfam (PF00575) Pfam (PF07541) | Trypanosoma cruzi | |
| 6 | F (j) | 60S ribosomal protein L40 | polymer | 150 | 16624.5 | 1 | UniProt (A0A2V2VP49) Pfam (PF00240) Pfam (PF01599) | Trypanosoma cruzi | Ubiquitin-60S ribosomal protein L40 |
| 7 | G (n) | Translation initiation factor, putative | polymer | 343 | 38227.2 | 1 | UniProt (Q4DH88) Pfam (PF01873) | Trypanosoma cruzi | |
| 8 | H (p) | Guanine nucleotide-binding protein subunit beta-like protein | polymer | 318 | 35070.3 | 1 | UniProt (Q4DTN2) Pfam (PF00400) | Trypanosoma cruzi | |
| 9 | I (r) | 40S ribosomal protein S16, putative | polymer | 149 | 16841.6 | 1 | UniProt (Q4DEK4) Pfam (PF00380) | Trypanosoma cruzi | |
| 10 | J (u) | 40S ribosomal protein S18, putative | polymer | 153 | 17585.5 | 1 | UniProt (Q4E093) Pfam (PF00416) | Trypanosoma cruzi | |
| 11 | K (m) | 40S ribosomal protein S23, putative | polymer | 143 | 15960.7 | 1 | UniProt (Q4DTQ1) Pfam (PF00164) | Trypanosoma cruzi | |
| 12 | L (Z) | 40S ribosomal protein S8 | polymer | 221 | 25246.8 | 1 | UniProt (Q4DU83) Pfam (PF01201) | Trypanosoma cruzi | |
| 13 | M (o) | 40S ribosomal protein S5, putative | polymer | 190 | 21292.7 | 1 | UniProt (Q4E0Q3) Pfam (PF00177) | Trypanosoma cruzi | |
| 14 | N (q) | 40S ribosomal protein S7 | polymer | 211 | 24896.5 | 1 | UniProt (Q4CUC7) Pfam (PF01251) | Trypanosoma cruzi | |
| 15 | O (R) | 40S ribosomal protein S13, putative | polymer | 151 | 17295.6 | 1 | UniProt (Q4DC38) Pfam (PF08069) Pfam (PF00312) | Trypanosoma cruzi | |
| 16 | P (S) | 40S ribosomal protein S27, putative | polymer | 86 | 9581.1 | 1 | UniProt (Q4DN73) Pfam (PF01667) | Trypanosoma cruzi | Ribosomal protein S27,putative |
| 17 | Q (t) | 40S ribosomal protein S26 | polymer | 112 | 12793.2 | 1 | UniProt (Q4CYE4) Pfam (PF01283) | Trypanosoma cruzi | |
| 18 | R (U) | 40S ribosomal protein S33 | polymer | 91 | 10023.5 | 1 | UniProt (A0A061J677) Pfam (PF01200) | Trypanosoma cruzi | |
| 19 | S (v) | 40S ribosomal protein S14, putative | polymer | 144 | 15596.0 | 1 | UniProt (Q4D6I5) Pfam (PF00411) | Trypanosoma cruzi | |
| 20 | T (X) | 40S ribosomal protein S11, putative | polymer | 173 | 20018.3 | 1 | UniProt (Q4D0U7) Pfam (PF16205) Pfam (PF00366) | Trypanosoma cruzi | |
| 21 | U (B) | Putative 40S ribosomal protein S9 | polymer | 190 | 22180.9 | 1 | UniProt (A0A2V2WBN2) Pfam (PF00163) Pfam (PF01479) | Trypanosoma cruzi | |
| 22 | V (F) | 40S ribosomal protein SA | polymer | 245 | 27913.2 | 1 | UniProt (Q4CQU0) Pfam (PF00318) | Trypanosoma cruzi | |
| 23 | W (d) | 40S ribosomal protein S2, putative | polymer | 263 | 28575.0 | 1 | UniProt (Q4DIZ9) Pfam (PF00333) Pfam (PF03719) | Trypanosoma cruzi | |
| 24 | X (g) | Putative 40S ribosomal protein S21 | polymer | 247 | 27634.3 | 1 | UniProt (A0A2V2UKQ3) Pfam (PF01249) | Trypanosoma cruzi | |
| 25 | Y (a) | 40S ribosomal protein S25 | polymer | 110 | 12380.0 | 1 | UniProt (Q4DTX6) Pfam (PF03297) | Trypanosoma cruzi | |
| 26 | Z (J) | RNA-binding protein, putative | polymer | 257 | 27676.3 | 1 | UniProt (Q4DY32) Pfam (PF00076) | Trypanosoma cruzi | |
| 27 | AA (h) | 40S ribosomal protein S12 | polymer | 141 | 15792.1 | 1 | UniProt (Q4CSL1) Pfam (PF01248) | Trypanosoma cruzi | |
| 28 | BA (5) | Eukaryotic translation initiation factor 2 subunit, putative | polymer | 477 | 52642.4 | 1 | UniProt (Q4CPV7) Pfam (PF00009) Pfam (PF09173) | Trypanosoma cruzi | |
| 29 | CA (P) | 40S ribosomal protein S6 | polymer | 250 | 28344.4 | 1 | UniProt (Q4DSU0) Pfam (PF01092) | Trypanosoma cruzi | |
| 30 | DA (i) | 40S ribosomal protein S17, putative | polymer | 141 | 16255.2 | 1 | UniProt (Q4DK39) Pfam (PF00833) | Trypanosoma cruzi | |
| 31 | EA (L) | Ribosomal protein S20, putative | polymer | 117 | 13248.5 | 1 | UniProt (Q4D6H7) Pfam (PF00338) | Trypanosoma cruzi | |
| 32 | FA (M) | 40S ribosomal protein S3, putative | polymer | 214 | 24188.4 | 1 | UniProt (Q4DMK9) Pfam (PF07650) Pfam (PF00189) | Trypanosoma cruzi | |
| 33 | GA (N) | 40S ribosomal protein S10, putative | polymer | 161 | 18284.7 | 1 | UniProt (Q4E088) Pfam (PF03501) | Trypanosoma cruzi | |
| 34 | HA (O) | Ribosomal protein S19, putative | polymer | 167 | 18861.3 | 1 | UniProt (Q4DJY1) Pfam (PF01090) | Trypanosoma cruzi | |
| 35 | IA (b) | 40S ribosomal protein S15a, putative | polymer | 145 | 16255.1 | 1 | UniProt (Q4CXX2) Pfam (PF00410) | Trypanosoma cruzi | |
| 36 | JA (c) | 40S ribosomal protein S30 | polymer | 66 | 7445.9 | 1 | UniProt (Q4DA48) Pfam (PF04758) | Trypanosoma cruzi | |
| 37 | KA (V) | Protein translation factor SUI1 homolog, putative | polymer | 109 | 12577.3 | 1 | UniProt (Q4DM75) Pfam (PF01253) | Trypanosoma cruzi | Translation factor SUI1,putative |
| 38 | LA (w) | Putative eukaryotic translation initiation factor 1A | polymer | 166 | 18418.5 | 1 | UniProt (A0A2V2WGW5) Pfam (PF01176) | Trypanosoma cruzi | |
| 39 | MA (E) | Eukaryotic translation initiation factor 3 subunit E | polymer | 407 | 46320.8 | 1 | UniProt (Q4D7F2) Pfam (PF01399) | Trypanosoma cruzi | eIF3e,Eukaryotic translation initiation factor 3 subunit 6 |
| 40 | NA (Y) | Eukaryotic translation initiation factor 5, putative | polymer | 379 | 42887.7 | 1 | UniProt (Q4DZB0) Pfam (PF01873) | Trypanosoma cruzi | |
| 41 | OA (Q) | Ribosomal protein S29, putative | polymer | 57 | 6651.8 | 1 | UniProt (Q4CXR4) Pfam (PF00253) | Trypanosoma cruzi | |
| 42 | PA (D) | eL41 | polymer | 34 | 4348.4 | 1 | UniProt (G0U1J3) Pfam (PF05162) | Trypanosoma cruzi | |
| 43 | QA (G) | JAB_MPN domain-containing protein | polymer | 345 | 38589.6 | 1 | UniProt (Q4DQZ2) Pfam (PF01398) | Trypanosoma cruzi | |
| 44 | RA (K) | CSN8_PSD8_EIF3K domain-containing protein | polymer | 203 | 22458.5 | 1 | UniProt (Q4DDK1) Pfam (PF10075) | Trypanosoma cruzi | |
| 45 | SA (T) | 40S ribosomal protein S15, putative | polymer | 152 | 17554.5 | 1 | UniProt (Q4DGZ5) Pfam (PF00203) | Trypanosoma cruzi | |
| 46 | TA (C) | Eukaryotic translation initiation factor 3 subunit 8, putative | polymer | 716 | 82331.1 | 1 | UniProt (Q4E3G1) Pfam (PF05470) | Trypanosoma cruzi | |
| 47 | UA (8) | eIF3A | polymer | 762 | 87439.9 | 1 | UniProt (Q4DL69) | Trypanosoma cruzi | |
| 48 | VA (W) | 40S ribosomal protein S3a-2 | polymer | 254 | 29134.7 | 1 | UniProt (Q4DZ41) Pfam (PF01015) | Trypanosoma cruzi | |
| 49 | WA (I) | Eukaryotic translation initiation factor 3 (EIF-3) interacting protein, putative | polymer | 489 | 56331.3 | 1 | UniProt (Q4D5W3) Pfam (PF10255) | Trypanosoma cruzi | |
| 50 | XA (H) | eIF3H | polymer | 334 | 38408.8 | 1 | UniProt (Q4DSJ1) | Trypanosoma cruzi | |
| 51 | YA (A) | Eukaryotic translation initiation factor 3 subunit 7-like protein, putative | polymer | 502 | 57493.0 | 1 | UniProt (Q4DCN0) Pfam (PF05091) | Trypanosoma cruzi | |
| 52 | ZA (l) | 40S ribosomal protein S4 | polymer | 273 | 30936.5 | 1 | UniProt (O62594) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) | Trypanosoma cruzi | |
| 53 | AB (n) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 54 | BB (5) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 55 | CB (5) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | non-polymer | 522.2 | 1 | Chemie (GNP) |
Sequence modifications
0: 0 - 2320 (GenBank: 320364483)
b: -14 - 130 (UniProt: Q4CXX2)
| PDB | External Database | Details |
|---|---|---|
| C 143 | A 144 | conflict |
| C 805 | U 806 | conflict |
| U 2321 | - | insertion |
| U 2322 | - | insertion |
| U 2323 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| Thr 83 | Ala 98 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 52 |
| Total formula weight | 2327722.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 611.9 | |
| All* | Total formula weight | 2328334.2 |
