7APK
Structure of the human THO - UAP56 complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, I, a, i | THO complex subunit 1 | polymer | 711 | 81138.4 | 4 | UniProt (Q96FV9) Pfam (PF11957) Pfam (PF00531) In PDB | Homo sapiens (Human) | Tho1,Nuclear matrix protein p84,p84N5,hTREX84 |
2 | B, J, b, j | THO complex subunit 2 | polymer | 1226 | 141584.6 | 4 | UniProt (Q8NI27) Pfam (PF16134) Pfam (PF11732) Pfam (PF11262) In PDB | Homo sapiens (Human) | Tho2,hTREX120 |
3 | C, K, c, k | THO complex subunit 3 | polymer | 395 | 43279.4 | 4 | UniProt (Q96J01) Pfam (PF00400) Pfam (PF12894) Pfam (PF07676) In PDB | Homo sapiens (Human) | Tho3,TEX1 homolog,hTREX45 |
4 | E, M, e, m | THO complex subunit 5 homolog | polymer | 683 | 78652.9 | 4 | UniProt (Q13769) Pfam (PF09766) In PDB | Homo sapiens (Human) | Functional spliceosome-associated protein 79,fSAP79,NF2/meningioma region protein pK1.3,Placental protein 39.2,PP39.2,hTREX90 |
5 | F, N, f, n | THO complex subunit 6 homolog | polymer | 341 | 37577.9 | 4 | UniProt (Q86W42) Pfam (PF00400) In PDB | Homo sapiens (Human) | Functional spliceosome-associated protein 35,fSAP35,WD repeat-containing protein 58 |
6 | G, O, g, o | THO complex subunit 7 homolog | polymer | 204 | 23782.0 | 4 | UniProt (Q6I9Y2) Pfam (PF05615) In PDB | Homo sapiens (Human) | Functional spliceosome-associated protein 24,fSAP24,Ngg1-interacting factor 3-like protein 1-binding protein 1,NIF3L1-binding protein 1,hTREX30 |
7 | H, P, h, p | Spliceosome RNA helicase DDX39B | polymer | 451 | 51612.2 | 4 | UniProt (Q13838) Pfam (PF00270) Pfam (PF00271) In PDB | Homo sapiens (Human) | 56 kDa U2AF65-associated protein,ATP-dependent RNA helicase p47,DEAD box protein UAP56,HLA-B-associated transcript 1 protein |
8 | X, x | THOC2 anchor (putative) | polymer | 37 | 3166.9 | 2 | Homo sapiens |
Sequence modifications
A, I, a, i: 2 - 657 (UniProt: Q96FV9)
B, J, b, j: 1 - 1203 (UniProt: Q8NI27)
C, K, c, k: 1 - 351 (UniProt: Q96J01)
E, M, e, m: 1 - 683 (UniProt: Q13769)
H, P, h, p: 1 - 428 (UniProt: Q13838)
PDB | External Database | Details |
---|---|---|
Met -53 | - | initiating methionine |
Gly -52 | - | expression tag |
Lys -51 | - | expression tag |
Pro -50 | - | expression tag |
Ile -49 | - | expression tag |
Pro -48 | - | expression tag |
Asn -47 | - | expression tag |
Pro -46 | - | expression tag |
Leu -45 | - | expression tag |
Leu -44 | - | expression tag |
Gly -43 | - | expression tag |
Leu -42 | - | expression tag |
Asp -41 | - | expression tag |
Ser -40 | - | expression tag |
Thr -39 | - | expression tag |
Gly -38 | - | expression tag |
Ser -37 | - | expression tag |
Gly -36 | - | expression tag |
Lys -35 | - | expression tag |
Pro -34 | - | expression tag |
Ile -33 | - | expression tag |
Pro -32 | - | expression tag |
Asn -31 | - | expression tag |
Pro -30 | - | expression tag |
Leu -29 | - | expression tag |
Leu -28 | - | expression tag |
Gly -27 | - | expression tag |
Leu -26 | - | expression tag |
Asp -25 | - | expression tag |
Ser -24 | - | expression tag |
Thr -23 | - | expression tag |
Gly -22 | - | expression tag |
Ser -21 | - | expression tag |
Gly -20 | - | expression tag |
Lys -19 | - | expression tag |
Pro -18 | - | expression tag |
Ile -17 | - | expression tag |
Pro -16 | - | expression tag |
Asn -15 | - | expression tag |
Pro -14 | - | expression tag |
Leu -13 | - | expression tag |
Leu -12 | - | expression tag |
Gly -11 | - | expression tag |
Leu -10 | - | expression tag |
Asp -9 | - | expression tag |
Ser -8 | - | expression tag |
Thr -7 | - | expression tag |
Leu -6 | - | expression tag |
Glu -5 | - | expression tag |
Val -4 | - | expression tag |
Leu -3 | - | expression tag |
Phe -2 | - | expression tag |
Gln -1 | - | expression tag |
Gly 0 | - | expression tag |
Pro 1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -22 | - | initiating methionine |
Lys -21 | - | expression tag |
His -20 | - | expression tag |
His -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
Ser -10 | - | expression tag |
Ala -9 | - | expression tag |
Gly -8 | - | expression tag |
Leu -7 | - | expression tag |
Glu -6 | - | expression tag |
Val -5 | - | expression tag |
Leu -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
Pro 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -43 | - | initiating methionine |
Lys -42 | - | expression tag |
Gly -41 | - | expression tag |
Ser -40 | - | expression tag |
Ala -39 | - | expression tag |
Trp -38 | - | expression tag |
Ser -37 | - | expression tag |
His -36 | - | expression tag |
Pro -35 | - | expression tag |
Gln -34 | - | expression tag |
Phe -33 | - | expression tag |
Glu -32 | - | expression tag |
Lys -31 | - | expression tag |
Gly -30 | - | expression tag |
Gly -29 | - | expression tag |
Gly -28 | - | expression tag |
Ser -27 | - | expression tag |
Gly -26 | - | expression tag |
Gly -25 | - | expression tag |
Gly -24 | - | expression tag |
Ser -23 | - | expression tag |
Gly -22 | - | expression tag |
Gly -21 | - | expression tag |
Ser -20 | - | expression tag |
Ala -19 | - | expression tag |
Trp -18 | - | expression tag |
Ser -17 | - | expression tag |
His -16 | - | expression tag |
Pro -15 | - | expression tag |
Gln -14 | - | expression tag |
Phe -13 | - | expression tag |
Glu -12 | - | expression tag |
Lys -11 | - | expression tag |
Thr -10 | - | expression tag |
Ala -9 | - | expression tag |
Gly -8 | - | expression tag |
Leu -7 | - | expression tag |
Glu -6 | - | expression tag |
Val -5 | - | expression tag |
Leu -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
Pro 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ile 525 | Val 525 | conflict |
Ile 579 | Val 579 | conflict |
PDB | External Database | Details |
---|---|---|
Gly -22 | - | expression tag |
Pro -21 | - | expression tag |
Met -20 | - | expression tag |
Lys -19 | - | expression tag |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ala -16 | - | expression tag |
Trp -15 | - | expression tag |
Ser -14 | - | expression tag |
His -13 | - | expression tag |
Pro -12 | - | expression tag |
Gln -11 | - | expression tag |
Phe -10 | - | expression tag |
Glu -9 | - | expression tag |
Lys -8 | - | expression tag |
Leu -7 | - | expression tag |
Glu -6 | - | expression tag |
Val -5 | - | expression tag |
Leu -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
Pro 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 30 |
Total formula weight | 1836843.3 | |
All* | Total formula weight | 1836843.3 |