7AI1
Crystal structure of human MDM2-G443T RING domain homodimer bound to UbcH5B-Ub (Crystal form 2)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (AAA, DDD) | E3 ubiquitin-protein ligase Mdm2 | polymer | 75 | 8329.9 | 2 | UniProt (Q00987) Pfam (PF13920) | Homo sapiens (Human) | Double minute 2 protein,Hdm2,Oncoprotein Mdm2,RING-type E3 ubiquitin transferase Mdm2,p53-binding protein Mdm2 |
| 2 | B, E (BBB, EEE) | Ubiquitin-conjugating enzyme E2 D2 | polymer | 147 | 16851.4 | 2 | UniProt (P62837) Pfam (PF00179) | Homo sapiens (Human) | (E3-independent) E2 ubiquitin-conjugating enzyme D2,E2 ubiquitin-conjugating enzyme D2,Ubiquitin carrier protein D2,Ubiquitin-conjugating enzyme E2(17)KB 2,Ubiquitin-conjugating enzyme E2-17 kDa 2,Ubiquitin-protein ligase D2,p53-regulated ubiquitin-conjugating enzyme 1 |
| 3 | C, F (CCC, FFF) | Polyubiquitin-B | polymer | 81 | 8922.1 | 2 | UniProt (P0CG47) Pfam (PF00240) | Homo sapiens (Human) | |
| 4 | G, L (AAA, DDD) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 5 | H, I, M, N (AAA, DDD) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 6 | J, K (BBB) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 7 | O, P, Q, R, S... (AAA, BBB, CCC, DDD, EEE...) | water | water | 18.0 | 278 | Chemie (HOH) |
Sequence modifications
AAA, DDD: 419 - 491 (UniProt: Q00987)
BBB, EEE: 1 - 147 (UniProt: P62837)
CCC, FFF: -2 - 76 (UniProt: P0CG47)
| PDB | External Database | Details |
|---|---|---|
| Gly 417 | - | expression tag |
| Ser 418 | - | expression tag |
| Thr 443 | Gly 443 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Arg 22 | Ser 22 | engineered mutation |
| Lys 85 | Cys 85 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Ser -3 | - | expression tag |
| Ser 0 | - | insertion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 68206.9 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 456.7 | |
| All* | Total formula weight | 68663.5 |






