7A0Y
Structure of dimeric sodium proton antiporter NhaA K300R variant, at pH 8.2, crystallized with chimeric Fab antibodies
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Na(+)/H(+) antiporter NhaA | polymer | 411 | 44047.3 | 2 | UniProt (Q8ZRZ3) Pfam (PF06965) In PDB | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Sodium/proton antiporter NhaA |
2 | C, E | chimeric antibody Fab-F6, heavy chain,chimeric antibody Fab-F6, heavy chain | polymer | 252 | 26305.0 | 2 | Gallus gallus (Chicken) | ||
3 | D, F | chimeric antibody Fab-F6, light chain,chimeric antibody Fab-F6, light chain | polymer | 210 | 22393.8 | 2 | Gallus gallus (Chicken) | ||
4 | A | CARDIOLIPIN | non-polymer | 1464.0 | 1 | Chemie (CDL) | |||
5 | A, B | 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE | non-polymer | 705.0 | 3 | Chemie (3PH) | |||
6 | A, B | PHOSPHATE ION | non-polymer | 95.0 | 2 | Chemie (PO4) | |||
7 | A, B | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 2 | Chemie (PG4) | |||
8 | B | 1,2-Distearoyl-sn-glycerophosphoethanolamine | non-polymer | 748.1 | 1 | Chemie (3PE) | |||
9 | C, E | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
10 | water | water | 18.0 | 147 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 388 (UniProt: Q8ZRZ3)
C, E: 1 - 144 (PDB: 7A0Y)
C, E: 145 - 252 (PDB: 7A0Y)
D, F: 1 - 124 (PDB: 7A0Y)
D, F: 125 - 210 (PDB: 7A0Y)
PDB | External Database | Details |
---|---|---|
Met -4 | - | initiating methionine |
Asn -3 | - | expression tag |
Leu -2 | - | expression tag |
Gly -1 | - | expression tag |
Ile 0 | - | expression tag |
Leu 1 | - | expression tag |
Arg 300 | Lys 300 | engineered mutation |
Ser 389 | - | expression tag |
Glu 390 | - | expression tag |
Asn 391 | - | expression tag |
Leu 392 | - | expression tag |
Tyr 393 | - | expression tag |
Phe 394 | - | expression tag |
Gln 395 | - | expression tag |
Gly 396 | - | expression tag |
Gly 397 | - | expression tag |
Arg 398 | - | expression tag |
Gly 399 | - | expression tag |
Ser 400 | - | expression tag |
His 401 | - | expression tag |
His 402 | - | expression tag |
His 403 | - | expression tag |
His 404 | - | expression tag |
His 405 | - | expression tag |
His 406 | - | expression tag |
C, E: 145 - 252 (PDB: 7A0Y)
D, F: 1 - 124 (PDB: 7A0Y)
D, F: 125 - 210 (PDB: 7A0Y)
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 185492.2 | |
Non-Polymers* | Number of molecules | 13 |
Total formula weight | 5047.3 | |
All* | Total formula weight | 190539.5 |