6ZXS
Cold grown Pea Photosystem I
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Photosystem I P700 chlorophyll a apoprotein A1 | polymer | 743 | 82571.5 | 1 | UniProt (A0A0F6NFW5) | Pisum sativum (Pea) | PSI-A,PsaA |
| 2 | B (B) | Photosystem I P700 chlorophyll a apoprotein A2 | polymer | 733 | 82381.7 | 1 | UniProt (A0A0F6NGI2) | Pisum sativum (Pea) | PSI-B,PsaB |
| 3 | C (C) | Photosystem I iron-sulfur center | polymer | 80 | 8860.3 | 1 | UniProt (P10793) | Pisum sativum (Pea) | 9 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC |
| 4 | D (D) | PsaD | polymer | 143 | 16041.4 | 1 | UniProt (by SIFTS) (E1C9K8) | Pisum sativum (Pea) | |
| 5 | E (E) | PsaE | polymer | 66 | 7479.4 | 1 | UniProt (by SIFTS) (E1C9K6) | Pisum sativum (Pea) | |
| 6 | F (F) | Photosystem I reaction center subunit III | polymer | 154 | 17137.9 | 1 | UniProt (A0A0M3KL12) | Pisum sativum (Pea) | |
| 7 | G (G) | PsaG | polymer | 97 | 10678.0 | 1 | Pisum sativum (Pea) | ||
| 8 | H (H) | Photosystem I reaction center subunit VI | polymer | 88 | 9491.7 | 1 | UniProt (A0A0M3KL10) | Pisum sativum (Pea) | |
| 9 | I (I) | Photosystem I reaction center subunit VIII | polymer | 30 | 3296.0 | 1 | UniProt (P17227) | Pisum sativum (Pea) | PSI-I |
| 10 | J (J) | Photosystem I reaction center subunit IX | polymer | 42 | 4767.6 | 1 | UniProt (D5MAL3) | Pisum sativum (Pea) | PSI-J |
| 11 | K (K) | Photosystem I reaction center subunit X psaK | polymer | 80 | 7988.3 | 1 | UniProt (E1C9L3) | Pisum sativum (Pea) | |
| 12 | L (L) | PsaL domain-containing protein | polymer | 157 | 16565.0 | 1 | UniProt (E1C9L1) | Pisum sativum (Pea) | |
| 13 | M (1) | Lhca1 | polymer | 193 | 21335.4 | 1 | Pisum sativum (Pea) | ||
| 14 | N (2) | Chlorophyll a-b binding protein, chloroplastic | polymer | 208 | 22845.8 | 1 | UniProt (Q41038) Pfam (PF00504) | Pisum sativum (Pea) | |
| 15 | O (3) | Chlorophyll a-b binding protein 3, chloroplastic | polymer | 221 | 24139.5 | 1 | UniProt (Q32904) | Pisum sativum (Pea) | LHCII type III CAB-3 |
| 16 | P (4) | Chlorophyll a-b binding protein P4, chloroplastic | polymer | 198 | 21994.0 | 1 | UniProt (Q9SQL2) | Pisum sativum (Pea) | LHCI type III CAB-P4 |
| 17 | Q (A) | CHLOROPHYLL A ISOMER | non-polymer | 893.5 | 1 | Chemie (CL0) | |||
| 18 | AA, AB, AC, AD, AE... (A, B, F, 3, K...) | CHLOROPHYLL A | non-polymer | 893.5 | 138 | Chemie (CLA) | |||
| 19 | EB, ID (A, B) | PHYLLOQUINONE | non-polymer | 450.7 | 2 | Chemie (PQN) PubChem (4812) PubChem (21896458) PubChem (57138572) PubChem (5315258) PubChem (7048753) PubChem (7048755) PubChem (9846607) PubChem (92436622) PubChem (93233163) PubChem (93971968) PubChem (5280483) PubChem (5284607) PubChem (7048754) PubChem (133612476) PubChem (162999945) | |||
| 20 | FB, YD, ZD (A, C) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 3 | Chemie (SF4) | |||
| 21 | BI, DE, EE, FF, GB... (4, F, K, A, L...) | BETA-CAROTENE | non-polymer | 536.9 | 27 | Chemie (BCR) PubChem (573) PubChem (21672398) PubChem (176490061) PubChem (177696266) PubChem (46783370) PubChem (46846294) PubChem (54603957) PubChem (54612003) PubChem (5315709) PubChem (5353436) PubChem (5356616) PubChem (5927371) PubChem (86765360) PubChem (6477957) PubChem (9828626) PubChem (91827292) PubChem (10256668) PubChem (92863346) PubChem (92863347) PubChem (92863348) PubChem (12305639) PubChem (12305640) PubChem (12305642) PubChem (12305644) PubChem (12305647) PubChem (12305652) PubChem (5280489) PubChem (92863345) PubChem (100990628) PubChem (101525094) PubChem (101525095) PubChem (124919640) PubChem (124919639) PubChem (129651951) PubChem (132274419) PubChem (146673260) PubChem (152743364) PubChem (160505766) PubChem (145925599) PubChem (159562859) PubChem (172654026) PubChem (172878405) PubChem (173398668) | |||
| 22 | AH, FG, LB, MB, OD... (2, 1, A, B) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 6 | Chemie (LHG) PubChem (446440) PubChem (46936292) PubChem (73416066) PubChem (65144) PubChem (9547104) PubChem (11846227) PubChem (13305396) PubChem (138986743) | |||
| 23 | AF, FH, NB, OE, PE... (J, 2, A, G, B...) | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 9 | Chemie (LMT) | |||
| 24 | BH, CH, DH, EH, FE... (2, F, 1, A, B...) | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 18 | Chemie (LMG) | |||
| 25 | RB, VI (A, 4) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) PubChem (753) | |||
| 26 | HH, IE, OF, VD, ZE (2, F, 1, B, J) | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 5 | Chemie (DGD) PubChem (24865462) PubChem (24865463) PubChem (448441) PubChem (50904896) PubChem (53480668) PubChem (46936671) PubChem (447899) PubChem (4629344) PubChem (15991538) PubChem (134746152) PubChem (154573294) PubChem (140529801) PubChem (171123158) | |||
| 27 | JH, XD (3, B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) PubChem (271) | |||
| 28 | JE (F) | (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol | non-polymer | 568.9 | 1 | Chemie (ZEX) PubChem (91827303) PubChem (137350207) | |||
| 29 | DI, JG, KH, LH, PF... (4, 2, 3, 1, J) | (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | non-polymer | 568.9 | 7 | Chemie (LUT) PubChem (177565809) PubChem (181579) PubChem (177696530) PubChem (24728610) PubChem (25202165) PubChem (441664) PubChem (44481270) PubChem (25245095) PubChem (46835684) PubChem (53477744) PubChem (53477774) PubChem (53477760) PubChem (57922343) PubChem (6325550) PubChem (6433159) PubChem (31380) PubChem (90820720) PubChem (91240120) PubChem (91519940) PubChem (448437) PubChem (10210008) PubChem (10257404) PubChem (89305995) PubChem (93971688) PubChem (93971689) PubChem (93971690) PubChem (93971691) PubChem (94424892) PubChem (94424893) PubChem (91007743) PubChem (12359017) PubChem (91330154) PubChem (91467158) PubChem (16061195) PubChem (16061196) PubChem (16061204) PubChem (5281243) PubChem (93535598) PubChem (94424894) PubChem (101351905) PubChem (101351908) PubChem (101351909) PubChem (101351910) PubChem (100935514) PubChem (101351907) PubChem (101351906) PubChem (5368396) PubChem (101727094) PubChem (102093134) PubChem (102514741) PubChem (131801656) PubChem (12085680) PubChem (125183271) PubChem (125183272) PubChem (125183273) PubChem (125183613) PubChem (125183614) PubChem (126970006) PubChem (139335388) PubChem (131801655) PubChem (162679657) PubChem (162945700) PubChem (162945708) PubChem (139595700) PubChem (152743345) PubChem (156583347) PubChem (159139983) PubChem (175679236) PubChem (175679086) PubChem (162945701) PubChem (162945702) PubChem (162945703) PubChem (162945704) PubChem (162945705) PubChem (162945706) PubChem (162945707) PubChem (162945709) PubChem (169423521) PubChem (169954357) PubChem (172748694) | |||
| 30 | AG, CG, CI, NI, OI... (1, 4, 3, 2) | CHLOROPHYLL B | non-polymer | 907.5 | 17 | Chemie (CHL) | |||
| 31 | EI, KG (4, 2) | (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | non-polymer | 600.9 | 2 | Chemie (XAT) PubChem (179930) PubChem (24970201) PubChem (448438) PubChem (46936684) PubChem (53477762) PubChem (51346155) PubChem (5282218) PubChem (5315242) PubChem (6384269) PubChem (6442428) PubChem (92096) PubChem (9851662) PubChem (12358665) PubChem (12358669) PubChem (98049828) PubChem (101341888) PubChem (101341890) PubChem (101341892) PubChem (101341893) PubChem (101341894) PubChem (101341895) PubChem (98049827) PubChem (101341889) PubChem (101341891) PubChem (6852159) PubChem (126456015) PubChem (12358664) PubChem (125183415) PubChem (125183416) PubChem (125183417) PubChem (129888894) PubChem (155293357) PubChem (162964874) PubChem (137331554) PubChem (163187351) PubChem (152743429) PubChem (177696491) PubChem (162964869) PubChem (162964870) PubChem (162964871) PubChem (162964872) PubChem (162964873) PubChem (162964875) PubChem (162964876) PubChem (163186889) PubChem (169544055) PubChem (171036315) PubChem (172817291) |
Sequence modifications
F: 78 - 231 (UniProt: A0A0M3KL12)
H: 53 - 140 (UniProt: A0A0M3KL10)
J: 1 - 42 (UniProt: D5MAL3)
K: 47 - 126 (UniProt: E1C9L3)
L: 54 - 210 (UniProt: E1C9L1)
4: 52 - 249 (UniProt: Q9SQL2)
| PDB | External Database | Details |
|---|---|---|
| Ala 80 | Ser 3 | conflict |
| Asp 87 | Glu 10 | conflict |
| Leu 108 | Ile 31 | conflict |
| Pro 111 | Ala 34 | conflict |
| Gly 134 | Ala 57 | conflict |
| Asp 188 | Glu 111 | conflict |
| Thr 204 | Ser 127 | conflict |
| Gly 205 | Arg 128 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Leu 60 | Ile 9 | conflict |
| Asn 79 | Ser 28 | conflict |
| Ser 80 | Pro 29 | conflict |
| Ala 116 | Thr 65 | conflict |
| Lys 126 | Val 75 | conflict |
| Gln 134 | Lys 83 | conflict |
| Leu 139 | - | insertion |
| - | Lys 89 | deletion |
| PDB | External Database | Details |
|---|---|---|
| Phe 32 | Leu 32 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 86 | Val 42 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Val 57 | Ile 7 | conflict |
| Val 79 | Ile 29 | conflict |
| Gly 88 | Ala 38 | conflict |
| Asn 94 | Ser 44 | conflict |
| Phe 108 | Tyr 58 | conflict |
| Ile 143 | Leu 93 | conflict |
| Asp 157 | Ala 107 | conflict |
| Gln 172 | Glu 122 | conflict |
| Phe 201 | Tyr 151 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Lys 89 | Arg 89 | conflict |
| Asp 128 | Ala 128 | conflict |
| Phe 149 | Ser 149 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 357573.7 | |
| Non-Polymers* | Number of molecules | 240 |
| Total formula weight | 189939.6 | |
| All* | Total formula weight | 547513.3 |






