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6ZV6

Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1218S ribosomal RNApolymer1869602805.91Homo sapiens
2A40S ribosomal protein SApolymer29532883.91UniProt (P08865)
Pfam (PF00318)
Pfam (PF16122)
In PDB
Homo sapiens (Human)37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Colon carcinoma laminin-binding protein,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,Multidrug resistance-associated protein MGr1-Ag,NEM/1CHD4,Small ribosomal subunit protein uS2
3B40S ribosomal protein S3apolymer26430002.11UniProt (P61247)
Pfam (PF01015)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS1,v-fos transformation effector protein,Fte-1
4C40S ribosomal protein S2polymer29331376.51UniProt (P15880)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Homo sapiens (Human)40S ribosomal protein S4,Protein LLRep3,Small ribosomal subunit protein uS5
5D40S ribosomal protein S3polymer24326729.41UniProt (P23396)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS3
6E40S ribosomal protein S4, X isoformpolymer26329654.91UniProt (P62701)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
Pfam (PF08071)
In PDB
Homo sapiens (Human)SCR10,Single copy abundant mRNA protein,Small ribosomal subunit protein eS4
7F40S ribosomal protein S5polymer20422913.51UniProt (P46782)
Pfam (PF00177)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS7
8G40S ribosomal protein S6polymer24928751.91UniProt (P62753)
Pfam (PF01092)
In PDB
Homo sapiens (Human)Phosphoprotein NP33,Small ribosomal subunit protein eS6
9H40S ribosomal protein S7polymer19422168.91UniProt (P62081)
Pfam (PF01251)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS7
10I40S ribosomal protein S8polymer20824263.41UniProt (P62241)
Pfam (PF01201)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS8
11J40S ribosomal protein S9polymer19422641.61UniProt (P46781)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS4
12K40S ribosomal protein S10polymer16518933.81UniProt (P46783)
Pfam (PF03501)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS10
13L40S ribosomal protein S11polymer15818468.81UniProt (P62280)
Pfam (PF16205)
Pfam (PF00366)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS17
14M40S ribosomal protein S12polymer13214539.01UniProt (P25398)
Pfam (PF01248)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS12
15N40S ribosomal protein S13polymer15117259.41UniProt (P62277)
Pfam (PF08069)
Pfam (PF00312)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS15
16O40S ribosomal protein S14polymer15116302.81UniProt (P62263)
Pfam (PF00411)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS11
17P40S ribosomal protein S15polymer14517076.21UniProt (P62841)
Pfam (PF00203)
In PDB
Homo sapiens (Human)RIG protein,Small ribosomal subunit protein uS19
18Q40S ribosomal protein S16polymer14616477.41UniProt (P62249)
Pfam (PF00380)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS9
19R40S ribosomal protein S17polymer13515578.21UniProt (P08708)
Pfam (PF00833)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS17
20S40S ribosomal protein S18polymer15217759.81UniProt (P62269)
Pfam (PF00416)
In PDB
Homo sapiens (Human)Ke-3,Ke3,Small ribosomal subunit protein uS13
21a40S ribosomal protein S26polymer11513047.51UniProt (P62854)
Pfam (PF01283)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS26
22U40S ribosomal protein S20polymer11913398.81UniProt (P60866)
Pfam (PF00338)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS10
23V40S ribosomal protein S21polymer839124.41UniProt (P63220)
Pfam (PF01249)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS21
24W40S ribosomal protein S15apolymer13014865.61UniProt (P62244)
Pfam (PF00410)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS8
25X40S ribosomal protein S23polymer14315844.71UniProt (P62266)
Pfam (PF00164)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS12
26Y40S ribosomal protein S24polymer13315463.31UniProt (P62847)
Pfam (PF01282)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS24
27Z40S ribosomal protein S25polymer12513776.21UniProt (P62851)
Pfam (PF03297)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS25
28b40S ribosomal protein S27polymer849480.21UniProt (P42677)
Pfam (PF01667)
In PDB
Homo sapiens (Human)Metallopan-stimulin 1,MPS-1,Small ribosomal subunit protein eS27
29c40S ribosomal protein S28polymer697855.11UniProt (P62857)
Pfam (PF01200)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS28
30d40S ribosomal protein S29polymer566690.81UniProt (P62273)
Pfam (PF00253)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein uS14
31e40S ribosomal protein S30polymer596668.91UniProt (P62861)
Pfam (PF04758)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS30
32fUbiquitin-40S ribosomal protein S27apolymer15618004.01UniProt (P62979)
Pfam (PF00240)
Pfam (PF01599)
In PDB
Homo sapiens (Human)Ubiquitin carboxyl extension protein 80
33gReceptor of activated protein C kinase 1polymer31735115.71UniProt (P63244)
Pfam (PF00400)
In PDB
Homo sapiens (Human)Cell proliferation-inducing gene 21 protein,Guanine nucleotide-binding protein subunit beta-2-like 1,Guanine nucleotide-binding protein subunit beta-like protein 12.3,Human lung cancer oncogene 7 protein,HLC-7,Receptor for activated C kinase,Small ribosomal subunit protein RACK1
34T40S ribosomal protein S19polymer14516091.61UniProt (P39019)
Pfam (PF01090)
In PDB
Homo sapiens (Human)Small ribosomal subunit protein eS19
35hSerine/threonine-protein kinase RIO1polymer56865772.11UniProt (Q9BRS2)
Pfam (PF01163)
In PDB
Homo sapiens (Human)RIO kinase 1
362, hMAGNESIUM IONnon-polymer24.33Chemie (MG)
37aZINC IONnon-polymer65.41Chemie (ZN)
38hADENOSINE-5'-DIPHOSPHATEnon-polymer427.21Chemie (ADP)
39waterwater18.03Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains35
Total formula weight1287786.0
Non-Polymers*Number of molecules5
Total formula weight565.5
All*Total formula weight1288351.5
*Water molecules are not included.

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PDB entries from 2024-07-24

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