6ZOK
SARS-CoV-2-Nsp1-40S complex, focused on body
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 2 | 18S ribosomal RNA | polymer | 1869 | 602777.9 | 1 | Homo sapiens (Human) | ||
| 2 | A | 40S ribosomal protein SA | polymer | 295 | 32883.9 | 1 | UniProt (P08865) Pfam (PF00318) Pfam (PF16122) In PDB | Homo sapiens (Human) | 37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Colon carcinoma laminin-binding protein,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,Multidrug resistance-associated protein MGr1-Ag,NEM/1CHD4,Small ribosomal subunit protein uS2 |
| 3 | B | 40S ribosomal protein S3a | polymer | 264 | 30002.1 | 1 | UniProt (P61247) Pfam (PF01015) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS1,v-fos transformation effector protein,Fte-1 |
| 4 | C | 40S ribosomal protein S2 | polymer | 293 | 31376.5 | 1 | UniProt (P15880) Pfam (PF00333) Pfam (PF03719) In PDB | Homo sapiens (Human) | 40S ribosomal protein S4,Protein LLRep3,Small ribosomal subunit protein uS5 |
| 5 | E | 40S ribosomal protein S4, X isoform | polymer | 263 | 29654.9 | 1 | UniProt (P62701) Pfam (PF16121) Pfam (PF08071) Pfam (PF00900) Pfam (PF00467) In PDB | Homo sapiens (Human) | SCR10,Single copy abundant mRNA protein,Small ribosomal subunit protein eS4 |
| 6 | G | 40S ribosomal protein S6 | polymer | 249 | 28751.9 | 1 | UniProt (P62753) Pfam (PF01092) In PDB | Homo sapiens (Human) | Phosphoprotein NP33,Small ribosomal subunit protein eS6 |
| 7 | H | 40S ribosomal protein S7 | polymer | 194 | 22168.9 | 1 | UniProt (P62081) Pfam (PF01251) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS7 |
| 8 | I | 40S ribosomal protein S8 | polymer | 208 | 24263.4 | 1 | UniProt (P62241) Pfam (PF01201) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS8 |
| 9 | J | 40S ribosomal protein S9 | polymer | 194 | 22641.6 | 1 | UniProt (P46781) Pfam (PF00163) Pfam (PF01479) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein uS4 |
| 10 | L | 40S ribosomal protein S11 | polymer | 158 | 18468.8 | 1 | UniProt (P62280) Pfam (PF16205) Pfam (PF00366) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein uS17 |
| 11 | N | 40S ribosomal protein S13 | polymer | 151 | 17259.4 | 1 | UniProt (P62277) Pfam (PF08069) Pfam (PF00312) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein uS15 |
| 12 | O | 40S ribosomal protein S14 | polymer | 151 | 16302.8 | 1 | UniProt (P62263) Pfam (PF00411) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein uS11 |
| 13 | R | 40S ribosomal protein S17 | polymer | 135 | 15578.2 | 1 | UniProt (P08708) Pfam (PF00833) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS17 |
| 14 | V | 40S ribosomal protein S21 | polymer | 83 | 9124.4 | 1 | UniProt (P63220) Pfam (PF01249) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS21 |
| 15 | W | 40S ribosomal protein S15a | polymer | 130 | 14865.6 | 1 | UniProt (P62244) Pfam (PF00410) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein uS8 |
| 16 | X | 40S ribosomal protein S23 | polymer | 143 | 15844.7 | 1 | UniProt (P62266) Pfam (PF00164) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein uS12 |
| 17 | Y | 40S ribosomal protein S24 | polymer | 130 | 15107.9 | 1 | UniProt (P62847) Pfam (PF01282) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS24 |
| 18 | a | 40S ribosomal protein S26 | polymer | 101 | 11645.8 | 1 | UniProt (P62854) Pfam (PF01283) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS26 |
| 19 | b | 40S ribosomal protein S27 | polymer | 82 | 9210.8 | 1 | UniProt (P42677) Pfam (PF01667) In PDB | Homo sapiens (Human) | Metallopan-stimulin 1,MPS-1,Small ribosomal subunit protein eS27 |
| 20 | e | 40S ribosomal protein S30 | polymer | 56 | 6302.5 | 1 | UniProt (P62861) Pfam (PF04758) In PDB | Homo sapiens (Human) | Small ribosomal subunit protein eS30 |
| 21 | j | Non-structural protein 1 | polymer | 180 | 19801.3 | 1 | UniProt (P0DTD1) Pfam (PF11501) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | pp1ab,ORF1ab polyprotein,Non-structural protein 1 |
| 22 | h | 60S ribosomal protein L41 | polymer | 25 | 3473.5 | 1 | UniProt (P62945) Pfam (PF05162) In PDB | Homo sapiens (Human) | HG12,Large ribosomal subunit protein eL41 |
| 23 | 2, X, L | MAGNESIUM ION | non-polymer | 24.3 | 109 | Chemie (MG) | |||
| 24 | a | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 22 |
| Total formula weight | 997506.6 | |
| Non-Polymers* | Number of molecules | 110 |
| Total formula weight | 2714.7 | |
| All* | Total formula weight | 1000221.2 |
