6ZAY
Crystal structure of Atg16L in complex with GDP-bound Rab33B
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Ras-related protein Rab-33B | polymer | 192 | 21975.3 | 2 | UniProt (Q9H082) Pfam (PF00071) In PDB | Homo sapiens (Human) | |
2 | C, D | Autophagy-related protein 16-1 | polymer | 126 | 14532.0 | 2 | UniProt (Q8C0J2) Pfam (PF08614) In PDB | Mus musculus (Mouse) | APG16-like 1 |
3 | A, C, B | PHOSPHATE ION | non-polymer | 95.0 | 5 | Chemie (PO4) | |||
4 | A, B | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 6 | Chemie (PEG) | |||
5 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
6 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
7 | A, B | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 2 | Chemie (GDP) | |||
8 | water | water | 18.0 | 179 | Chemie (HOH) |
Sequence modifications
A, B: 30 - 218 (UniProt: Q9H082)
C, D: 141 - 265 (UniProt: Q8C0J2)
PDB | External Database | Details |
---|---|---|
Gly 27 | - | expression tag |
Pro 28 | - | expression tag |
Met 29 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 140 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 73014.7 | |
Non-Polymers* | Number of molecules | 19 |
Total formula weight | 2294.9 | |
All* | Total formula weight | 75309.6 |