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6Z48

Crystal structure of Thrombin in complex with macrocycle X1vE

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E, G
(L, A, C, E)
Thrombin light chainpolymer364096.54UniProt (P00734)
Pfam (PF09396)
Homo sapiens (Human)
2B, D, F, H
(H, B, D, F)
Thrombin heavy chainpolymer25929780.24UniProt (P00734)
Pfam (PF00089)
Homo sapiens (Human)
3I, K, M, O
(H, B, D, F)
SODIUM IONnon-polymer23.04Chemie (NA)
4J, L, N, P
(H, B, D, F)
5-chloranyl-N-[[(4S,15R)-2,5,13,16-tetrakis(oxidanylidene)-15-propan-2-yl-9,10-dithia-3,6,14,17-tetrazabicyclo[17.3.1]tricosa-1(22),19(23),20-trien-4-yl]methyl]thiophene-2-carboxamidenon-polymer626.24Chemie (X1V)
5Q, R, S, T, U...
(L, H, A, B, C...)
waterwater18.0399Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight135507.0
Non-Polymers*Number of molecules8
Total formula weight2596.8
All*Total formula weight138103.8
*Water molecules are not included.

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PDB entries from 2026-01-28

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