6Z2D
Crystal structure of wild type OgpA from Akkermansia muciniphila in P 41 21 2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | O-glycan protease | polymer | 370 | 41724.9 | 1 | UniProt (B2UR60) | Akkermansia muciniphila ATCC BAA-835 | |
| 2 | B (A) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 3 | C, D, E, F (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 4 | G (A) | FORMIC ACID | non-polymer | 46.0 | 1 | Chemie (FMT) | |||
| 5 | H, I (A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | J (A) | water | water | 18.0 | 153 | Chemie (HOH) |
Sequence modifications
A: 25 - 385 (UniProt: B2UR60)
| PDB | External Database | Details |
|---|---|---|
| Gly 386 | - | expression tag |
| Ser 387 | - | expression tag |
| Gly 388 | - | expression tag |
| His 389 | - | expression tag |
| His 390 | - | expression tag |
| His 391 | - | expression tag |
| His 392 | - | expression tag |
| His 393 | - | expression tag |
| His 394 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 41724.9 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 619.3 | |
| All* | Total formula weight | 42344.3 |
