6YUH
Crystal structure of SMYD3 with diperodon R enantiomer bound to allosteric site
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Histone-lysine N-methyltransferase SMYD3 | polymer | 425 | 48830.7 | 1 | UniProt (Q9H7B4) Pfam (PF00856) Pfam (PF01753) | Homo sapiens (Human) | SET and MYND domain-containing protein 3,Zinc finger MYND domain-containing protein 1 |
| 2 | B (A) | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) | |||
| 3 | C, H, I (A) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 4 | D (A) | Diperodon | non-polymer | 397.5 | 1 | Chemie (POW) | |||
| 5 | E, F, G (A) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 6 | J (A) | water | water | 18.0 | 252 | Chemie (HOH) |
Sequence modifications
A: 3 - 427 (UniProt: Q9H7B4)
| PDB | External Database | Details |
|---|---|---|
| Asn 13 | Lys 13 | conflict |
| Arg 140 | Lys 140 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 48830.7 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1268.4 | |
| All* | Total formula weight | 50099.1 |
