6YRB
Crystal structure of the tetramerization domain of the glycoprotein Gn (Andes virus) at pH 7.5
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Envelope polyprotein | polymer | 149 | 15940.0 | 2 | UniProt (Q9E006) Pfam (PF20679) | Andes orthohantavirus | M polyprotein |
| 2 | C, D (C, D) | RNA (5'-D(*())-R(P*UP*UP*UP*())-3') | polymer | 5 | 1532.0 | 2 | Drosophila melanogaster | ||
| 3 | E (E) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 4 | F, G, H, I, J... (A, B) | IODIDE ION | non-polymer | 126.9 | 6 | Chemie (IOD) | |||
| 5 | L, M, N, O (A, B, C, D) | water | water | 18.0 | 55 | Chemie (HOH) |
Sequence modifications
A, B: 375 - 484 (UniProt: Q9E006)
| PDB | External Database | Details |
|---|---|---|
| Gly 485 | - | expression tag |
| Pro 486 | - | expression tag |
| Phe 487 | - | expression tag |
| Glu 488 | - | expression tag |
| Asp 489 | - | expression tag |
| Asp 490 | - | expression tag |
| Asp 491 | - | expression tag |
| Asp 492 | - | expression tag |
| Lys 493 | - | expression tag |
| Ala 494 | - | expression tag |
| Gly 495 | - | expression tag |
| Trp 496 | - | expression tag |
| Ser 497 | - | expression tag |
| His 498 | - | expression tag |
| Pro 499 | - | expression tag |
| Gln 500 | - | expression tag |
| Phe 501 | - | expression tag |
| Glu 502 | - | expression tag |
| Lys 503 | - | expression tag |
| Gly 504 | - | expression tag |
| Gly 505 | - | expression tag |
| Gly 506 | - | expression tag |
| Ser 507 | - | expression tag |
| Gly 508 | - | expression tag |
| Gly 509 | - | expression tag |
| Gly 510 | - | expression tag |
| Ser 511 | - | expression tag |
| Gly 512 | - | expression tag |
| Gly 513 | - | expression tag |
| Gly 514 | - | expression tag |
| Ser 515 | - | expression tag |
| Trp 516 | - | expression tag |
| Ser 517 | - | expression tag |
| His 518 | - | expression tag |
| Pro 519 | - | expression tag |
| Gln 520 | - | expression tag |
| Phe 521 | - | expression tag |
| Glu 522 | - | expression tag |
| Lys 523 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 34943.9 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 732.7 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 761.4 | |
| All* | Total formula weight | 36438.0 |
