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6YNP

Crystal structure of YTHDC1 with compound T96C1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
YTHDC1polymer18320967.22UniProt (Q96MU7)
Pfam (PF04146)
Homo sapiens (Human)
2C, H
(A, B)
~{N}-methylpyridine-3-carboxamidenon-polymer136.22Chemie (PJH)
3D, E, F, G, I...
(A, B)
SULFATE IONnon-polymer96.17Chemie (SO4)
4L
(B)
CHLORIDE IONnon-polymer35.51Chemie (CL)
5M, N
(A, B)
waterwater18.0626Chemie (HOH)
Sequence modifications
A, B: 345 - 509 (UniProt: Q96MU7)
PDBExternal DatabaseDetails
Met 327-initiating methionine
His 328-expression tag
His 329-expression tag
His 330-expression tag
His 331-expression tag
His 332-expression tag
His 333-expression tag
Ser 334-expression tag
Ser 335-expression tag
Gly 336-expression tag
Arg 337-expression tag
Glu 338-expression tag
Asn 339-expression tag
Leu 340-expression tag
Tyr 341-expression tag
Phe 342-expression tag
Gln 343-expression tag
Gly 344-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight41934.3
Non-Polymers*Number of molecules10
Total formula weight980.2
All*Total formula weight42914.5
*Water molecules are not included.

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PDB entries from 2025-12-17

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