6YNJ
Crystal structure of YTHDC1 with compound DHU_DC1_046
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | YTHDC1 | polymer | 183 | 20967.2 | 2 | UniProt (Q96MU7) Pfam (PF04146) | Homo sapiens (Human) | |
| 2 | C, D, H (A, B) | (2~{R})-2-(2-chlorophenyl)-5,5-dimethyl-morpholine | non-polymer | 225.7 | 3 | Chemie (P0N) | |||
| 3 | E, F, G, I, J... (A, B) | SULFATE ION | non-polymer | 96.1 | 8 | Chemie (SO4) | |||
| 4 | N, O (A, B) | water | water | 18.0 | 545 | Chemie (HOH) |
Sequence modifications
A, B: 345 - 509 (UniProt: Q96MU7)
| PDB | External Database | Details |
|---|---|---|
| Met 327 | - | initiating methionine |
| His 328 | - | expression tag |
| His 329 | - | expression tag |
| His 330 | - | expression tag |
| His 331 | - | expression tag |
| His 332 | - | expression tag |
| His 333 | - | expression tag |
| Ser 334 | - | expression tag |
| Ser 335 | - | expression tag |
| Gly 336 | - | expression tag |
| Arg 337 | - | expression tag |
| Glu 338 | - | expression tag |
| Asn 339 | - | expression tag |
| Leu 340 | - | expression tag |
| Tyr 341 | - | expression tag |
| Phe 342 | - | expression tag |
| Gln 343 | - | expression tag |
| Gly 344 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 41934.3 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1445.6 | |
| All* | Total formula weight | 43380.0 |






