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6YMR

Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(E)
Thermolysinpolymer31634360.31UniProt (P43133)
Pfam (PF01447)
Pfam (PF02868)
Geobacillus stearothermophilus (Bacillus stearothermophilus)Neutral protease
2B
(E)
ZINC IONnon-polymer65.41Chemie (ZN)
3C, D, E, F
(E)
CALCIUM IONnon-polymer40.14Chemie (CA)
4G, H
(E)
DIMETHYL SULFOXIDEnon-polymer78.12Chemie (DMS)
5I
(E)
(((R)-1-(((benzyloxy)carbonyl)amino)-2-phenylethyl)oxidophosphoryl)glycyl-L-leucinatenon-polymer505.51Chemie (OZE)
6J
(E)
waterwater18.0254Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight34360.3
Non-Polymers*Number of molecules8
Total formula weight887.5
All*Total formula weight35247.8
*Water molecules are not included.

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PDB entries from 2025-12-03

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