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6YMR

Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin

Functional Information from GO Data
ChainGOidnamespacecontents
E0004222molecular_functionmetalloendopeptidase activity
E0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN E 401
ChainResidue
EHIS142
EHIS146
EGLU166
EOZE408

site_idAC2
Number of Residues6
Detailsbinding site for residue CA E 402
ChainResidue
EHOH709
EASP57
EASP59
EGLN61
EHOH572
EHOH582

site_idAC3
Number of Residues6
Detailsbinding site for residue CA E 403
ChainResidue
EASP138
EGLU177
EASP185
EGLU187
EGLU190
EHOH540

site_idAC4
Number of Residues6
Detailsbinding site for residue CA E 404
ChainResidue
EGLU177
EASN183
EASP185
EGLU190
EHOH524
EHOH546

site_idAC5
Number of Residues6
Detailsbinding site for residue CA E 405
ChainResidue
ETYR193
ETHR194
EILE197
EASP200
EHOH576
EHOH683

site_idAC6
Number of Residues4
Detailsbinding site for residue DMS E 406
ChainResidue
EGLY95
EPRO184
ETRP186
EHOH584

site_idAC7
Number of Residues6
Detailsbinding site for residue DMS E 407
ChainResidue
ETYR66
EHIS216
ESER218
ETYR251
EHOH521
EHOH703

site_idAC8
Number of Residues19
Detailsbinding site for residue OZE E 408
ChainResidue
ETHR48
ETYR110
EASN111
EASN112
EALA113
EPHE114
ETRP115
EHIS142
EGLU143
EHIS146
ETYR157
EASN165
EGLU166
EARG203
EHIS231
EZN401
EHOH537
EHOH557
EHOH573

Functional Information from PROSITE/UniProt
site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. VVAHELTHAV
ChainResidueDetails
EVAL139-VAL148

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10095","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PROSITE-ProRule","id":"PRU10095","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10095","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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