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6YMF

Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the PLP-Serine external aldimine state

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Serine hydroxymethyltransferasepolymer44748656.01UniProt (I7H6W6)Aphanothece halophyticaSerine methylase
2B, C, D, F, H...
(A)
GLYCEROLnon-polymer92.18Chemie (GOL)
3E
(A)
[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINEnon-polymer336.21Chemie (PLS)
4G
(A)
PENTAETHYLENE GLYCOLnon-polymer238.31Chemie (1PE)
5L
(A)
waterwater18.0401Chemie (HOH)
Sequence modifications
A: 1 - 427 (UniProt: I7H6W6)
PDBExternal DatabaseDetails
Met -19-initiating methionine
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight48656.0
Non-Polymers*Number of molecules10
Total formula weight1311.3
All*Total formula weight49967.3
*Water molecules are not included.

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PDB entries from 2026-02-11

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