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6YL0

Crystal structure of YTHDC1 with compound T_96

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
YTHDC1polymer18320967.22UniProt (Q96MU7)
Pfam (PF04146)
Homo sapiens (Human)
2C, J
(A, B)
~{N}-methylpyridine-3-carbothioamidenon-polymer152.22Chemie (OWH)
3D, E, F, G, H...
(A, B)
SULFATE IONnon-polymer96.18Chemie (SO4)
4I
(B)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
5N, O
(A, B)
waterwater18.0603Chemie (HOH)
Sequence modifications
A, B: 345 - 509 (UniProt: Q96MU7)
PDBExternal DatabaseDetails
Met 327-initiating methionine
His 328-expression tag
His 329-expression tag
His 330-expression tag
His 331-expression tag
His 332-expression tag
His 333-expression tag
Ser 334-expression tag
Ser 335-expression tag
Gly 336-expression tag
Arg 337-expression tag
Glu 338-expression tag
Asn 339-expression tag
Leu 340-expression tag
Tyr 341-expression tag
Phe 342-expression tag
Gln 343-expression tag
Gly 344-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight41934.3
Non-Polymers*Number of molecules11
Total formula weight1179.1
All*Total formula weight43113.4
*Water molecules are not included.

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PDB entries from 2024-11-13

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