6YKO
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11a
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Leucine--tRNA ligase | polymer | 877 | 98185.3 | 1 | UniProt (A0A5K1KQ39) Pfam (PF09334) Pfam (PF13603) Pfam (PF00133) Pfam (PF08264) UniProt (by SIFTS) (Q5FAJ3) In PDB | Neisseria gonorrhoeae | Leucyl-tRNA synthetase,LeuRS |
2 | A | [(2~{R},3~{S},4~{S},5~{R})-3,4-bis(oxidanyl)-5-[3-[4-(4-pentylphenyl)-1,2,3-triazol-1-yl]propyl]oxan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-4-methyl-pentanoyl]sulfamate | non-polymer | 595.8 | 1 | Chemie (OW5) | |||
3 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
4 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
5 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
6 | water | water | 18.0 | 207 | Chemie (HOH) |
Sequence modifications
A: 1 - 876 (UniProt: A0A5K1KQ39)
PDB | External Database | Details |
---|---|---|
Gly 0 | - | expression tag |
Asn 454 | Asp 456 | engineered mutation |
Ile 508 | Met 510 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 98185.3 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 809.6 | |
All* | Total formula weight | 98994.9 |