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6YKO

Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11a

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0002161molecular_functionaminoacyl-tRNA editing activity
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004823molecular_functionleucine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006418biological_processtRNA aminoacylation for protein translation
A0006429biological_processleucyl-tRNA aminoacylation
A0106074biological_processaminoacyl-tRNA metabolism involved in translational fidelity
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue OW5 A 1101
ChainResidue
AMET40
AASP80
ATYR513
AGLY543
AGLY544
AGLU546
AHIS547
AHIS551
AMET582
AVAL583
ALYS634
APHE41
AMET635
AHOH1284
APRO42
ATYR43
AHIS49
AGLY51
AHIS52
AASN55
ATYR56

site_idAC2
Number of Residues7
Detailsbinding site for residue EDO A 1102
ChainResidue
ATRP223
ALEU429
AARG430
AASP431
ATRP432
ATYR554
AHOH1231

site_idAC3
Number of Residues5
Detailsbinding site for residue EDO A 1103
ChainResidue
ATRP223
AGLU301
ATYR339
AARG428
AHOH1231

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 1104
ChainResidue
ACYS449
ACYS452
ACYS490
ACYS493

site_idAC5
Number of Residues6
Detailsbinding site for residue MG A 1105
ChainResidue
AGLU210
AHOH1286
AHOH1310
AHOH1389
AHOH1390
AHOH1406

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues12
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PypSGkLHMGHV
ChainResidueDetails
APRO42-VAL53

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00049
ChainResidueDetails
ALYS637

221051

PDB entries from 2024-06-12

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