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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6YEF

70S initiation complex with assigned rRNA modifications from Staphylococcus aureus

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1a16S rRNApolymer1556503394.31Staphylococcus aureus subsp. aureus NCTC 8325
2b30S ribosomal protein S2polymer25529136.41UniProt (Q2FZ25)
Pfam (PF00318)
In PDB		Staphylococcus aureus (strain NCTC 8325)
3c30S ribosomal protein S3polymer21724143.91UniProt (Q2FW12)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Staphylococcus aureus (strain NCTC 8325)
4d30S ribosomal protein S4polymer20023051.41UniProt (Q2FXK6)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Staphylococcus aureus (strain NCTC 8325)
5e30S ribosomal protein S5polymer16617770.51UniProt (Q2FW23)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Staphylococcus aureus (strain NCTC 8325)
6f30S ribosomal protein S6polymer9811613.11UniProt (Q2G113)
Pfam (PF01250)
In PDB		Staphylococcus aureus (strain NCTC 8325)
7g30S ribosomal protein S7polymer15617826.61UniProt (P48940)
Pfam (PF00177)
In PDB		Staphylococcus aureus (strain NCTC 8325)
8h30S ribosomal protein S8polymer13214854.31UniProt (Q2FW20)
Pfam (PF00410)
In PDB		Staphylococcus aureus (strain NCTC 8325)
9i30S ribosomal protein S9polymer13214857.01UniProt (Q2FW39)
Pfam (PF00380)
In PDB		Staphylococcus aureus (strain NCTC 8325)
10jribosomal protein uS10polymer10211598.51Staphylococcus aureus subsp. aureus NCTC 8325
11k30S ribosomal protein S11polymer12913908.01UniProt (Q2FW31)
Pfam (PF00411)
In PDB		Staphylococcus aureus (strain NCTC 8325)
12l30S ribosomal protein S12polymer13715320.91UniProt (P0A0H0)
Pfam (PF00164)
In PDB		Staphylococcus aureus (strain NCTC 8325)
13m30S ribosomal protein S13polymer12113747.91UniProt (Q2FW30)
Pfam (PF00416)
In PDB		Staphylococcus aureus (strain NCTC 8325)
14n30S ribosomal protein S14polymer8910570.51UniProt (Q2FYU5)
Pfam (PF00253)
In PDB		Staphylococcus aureus (strain NCTC 8325)
15o30S ribosomal protein S15polymer8910634.31UniProt (Q2G2Q1)
Pfam (PF00312)
In PDB		Staphylococcus aureus (strain NCTC 8325)
16p30S ribosomal protein S16polymer9110253.91UniProt (Q2FZ45)
Pfam (PF00886)
In PDB		Staphylococcus aureus (strain NCTC 8325)
17q30S ribosomal protein S17polymer8710196.91UniProt (Q2FW15)
Pfam (PF00366)
In PDB		Staphylococcus aureus (strain NCTC 8325)
18r30S ribosomal protein S18polymer809332.01UniProt (Q2G111)
Pfam (PF01084)
In PDB		Staphylococcus aureus (strain NCTC 8325)
19s30S ribosomal protein S19polymer9210639.31UniProt (Q2FW10)
Pfam (PF00203)
In PDB		Staphylococcus aureus (strain NCTC 8325)
20t30S ribosomal protein S20polymer839039.51UniProt (Q2FXY6)
Pfam (PF01649)
In PDB		Staphylococcus aureus (strain NCTC 8325)
21vmRNApolymer299536.91synthetic construct
22A23S rRNApolymer2923946780.81Staphylococcus aureus subsp. aureus NCTC 8325
23B5S rRNApolymer11536974.91Staphylococcus aureus subsp. aureus NCTC 8325
24D50S ribosomal protein L2polymer27730217.21UniProt (P60430)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Staphylococcus aureus (strain NCTC 8325)
25E50S ribosomal protein L3polymer22023760.31UniProt (Q2FW06)
Pfam (PF00297)
In PDB		Staphylococcus aureus (strain NCTC 8325)
26F50S ribosomal protein L4polymer20722495.71UniProt (Q2FW07)
Pfam (PF00573)
In PDB		Staphylococcus aureus (strain NCTC 8325)
27G50S ribosomal protein L5polymer17920296.61UniProt (Q2FW18)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Staphylococcus aureus (strain NCTC 8325)
28H50S ribosomal protein L6polymer17819818.61UniProt (Q2FW21)
Pfam (PF00347)
In PDB		Staphylococcus aureus (strain NCTC 8325)
29M50S ribosomal protein L13polymer14516359.41UniProt (Q2FW38)
Pfam (PF00572)
In PDB		Staphylococcus aureus (strain NCTC 8325)
30N50S ribosomal protein L14polymer12213157.31UniProt (Q2FW16)
Pfam (PF00238)
In PDB		Staphylococcus aureus (strain NCTC 8325)
31O50S ribosomal protein L15polymer14615628.91UniProt (P0A0F8)
Pfam (PF00828)
In PDB		Staphylococcus aureus (strain NCTC 8325)
32P50S ribosomal protein L16polymer14416274.01UniProt (Q2FW13)
Pfam (PF00252)
In PDB		Staphylococcus aureus (strain NCTC 8325)
33Q50S ribosomal protein L17polymer12213771.81UniProt (Q2FW33)
Pfam (PF01196)
In PDB		Staphylococcus aureus (strain NCTC 8325)
34R50S ribosomal protein L18polymer11913124.11UniProt (Q2FW22)
Pfam (PF00861)
In PDB		Staphylococcus aureus (strain NCTC 8325)
35S50S ribosomal protein L19polymer11613392.81UniProt (Q2FZ42)
Pfam (PF01245)
In PDB		Staphylococcus aureus (strain NCTC 8325)
36T50S ribosomal protein L20polymer11813720.31UniProt (Q2FXQ1)
Pfam (PF00453)
In PDB		Staphylococcus aureus (strain NCTC 8325)
37U50S ribosomal protein L21polymer10211354.11UniProt (Q2FXS8)
Pfam (PF00829)
In PDB		Staphylococcus aureus (strain NCTC 8325)
38V50S ribosomal protein L22polymer11712857.91UniProt (Q2FW11)
Pfam (PF00237)
In PDB		Staphylococcus aureus (strain NCTC 8325)
39W50S ribosomal protein L23polymer9110625.41UniProt (Q2FW08)
Pfam (PF00276)
In PDB		Staphylococcus aureus (strain NCTC 8325)
40X50S ribosomal protein L24polymer10511561.51UniProt (Q2FW17)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Staphylococcus aureus (strain NCTC 8325)
41Y50S ribosomal protein L25polymer21723810.61UniProt (Q2G0S0)
Pfam (PF01386)
Pfam (PF14693)
In PDB		Staphylococcus aureus (strain NCTC 8325)General stress protein CTC
42Z50S ribosomal protein L27polymer9410334.81UniProt (Q2FXT0)
Pfam (PF01016)
In PDB		Staphylococcus aureus (strain NCTC 8325)
43050S ribosomal protein L28polymer626995.31UniProt (Q2FZ60)
Pfam (PF00830)
In PDB		Staphylococcus aureus (strain NCTC 8325)
44150S ribosomal protein L29polymer698105.31UniProt (Q2FW14)
Pfam (PF00831)
In PDB		Staphylococcus aureus (strain NCTC 8325)
45250S ribosomal protein L30polymer596565.71UniProt (P0A0G2)
Pfam (PF00327)
In PDB		Staphylococcus aureus (strain NCTC 8325)
46350S ribosomal protein L31 type Bpolymer849737.91UniProt (Q2FWD8)
Pfam (PF01197)
In PDB		Staphylococcus aureus (strain NCTC 8325)
47450S ribosomal protein L32polymer586657.81UniProt (Q2FZF1)
Pfam (PF01783)
In PDB		Staphylococcus aureus (strain NCTC 8325)
48550S ribosomal protein L33 2polymer495885.81UniProt (Q2FY22)
Pfam (PF00471)
In PDB		Staphylococcus aureus (strain NCTC 8325)
49650S ribosomal protein L34polymer455454.61UniProt (Q2FUQ0)
Pfam (PF00468)
In PDB		Staphylococcus aureus (strain NCTC 8325)
50750S ribosomal protein L35polymer667722.41UniProt (Q2FXQ0)
Pfam (PF01632)
In PDB		Staphylococcus aureus (strain NCTC 8325)
51850S ribosomal protein L36polymer374318.41UniProt (Q2FW29)
Pfam (PF00444)
In PDB		Staphylococcus aureus (strain NCTC 8325)
52xP-site tRNApolymer7725023.21Escherichia coli DH5[alpha]
53a, A, X, x, v...MAGNESIUM IONnon-polymer24.3268Chemie (MG)
54a, APOTASSIUM IONnon-polymer39.120Chemie (K)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains52
Total formula weight2174209.4
Non-Polymers*Number of molecules288
Total formula weight7295.7
All*Total formula weight2181505.1
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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