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6YE2

Human Ecto-5'-nucleotidase (CD73) in complex with the AMPCP derivative A1202 (compound 4a in publication) in the closed form (crystal form IV)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
5'-nucleotidasepolymer53259260.42UniProt (P21589)
Pfam (PF00149)
Pfam (PF02872)
Homo sapiens (Human)5'-NT,Ecto-5'-nucleotidase
2C, D, G, H
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
3E, I
(A, B)
[(2~{R},3~{S},4~{R},5~{R})-5-[6-chloranyl-4-(cyclopentylamino)pyrazolo[3,4-d]pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxymethylphosphonic acidnon-polymer463.82Chemie (OO5)
4F, J
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
5K, L
(A, B)
waterwater18.0580Chemie (HOH)
Sequence modifications
A, B: 27 - 549 (UniProt: P21589)
PDBExternal DatabaseDetails
Met 26-initiating methionine
Asp 53Asn 53engineered mutation
Asp 311Asn 311engineered mutation
Asp 333Asn 333engineered mutation
Ala 376Thr 376variant
Asp 403Asn 403engineered mutation
Leu 550-expression tag
Glu 551-expression tag
His 552-expression tag
His 553-expression tag
His 554-expression tag
His 555-expression tag
His 556-expression tag
His 557-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight118520.8
Non-Polymers*Number of molecules8
Total formula weight1269.4
All*Total formula weight119790.2
*Water molecules are not included.

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PDB entries from 2025-07-02

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